Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03156 and SMc03157 are separated by 139 nucleotides SMc03157 and SMc03158 are separated by 38 nucleotides SMc03158 and SMc03159 overlap by 11 nucleotides
SMc03156: SMc03156 - hypothetical protein, at 3,113,657 to 3,114,604
SMc03156
SMc03157: SMc03157 - outer membrane lipoprotein transmembrane, at 3,114,744 to 3,115,520
SMc03157
SMc03158: SMc03158 - ABC transporter permease, at 3,115,559 to 3,116,224
SMc03158
SMc03159: SMc03159 - ABC transporter ATP-binding protein, at 3,116,214 to 3,117,290
SMc03159
Position (kb)
3115
3116
3117 Strain fitness (log2 ratio)
-1
0
1
2 at 3114.602 kb on + strand at 3114.603 kb on - strand at 3114.704 kb on - strand at 3114.715 kb on + strand at 3114.811 kb on + strand at 3115.190 kb on + strand, within SMc03157 at 3115.190 kb on + strand, within SMc03157 at 3115.191 kb on - strand, within SMc03157 at 3115.191 kb on - strand, within SMc03157 at 3115.205 kb on - strand, within SMc03157 at 3115.348 kb on + strand, within SMc03157 at 3115.348 kb on + strand, within SMc03157 at 3115.349 kb on - strand, within SMc03157 at 3115.349 kb on - strand, within SMc03157 at 3115.369 kb on + strand, within SMc03157 at 3115.371 kb on + strand, within SMc03157 at 3115.371 kb on + strand, within SMc03157 at 3115.371 kb on + strand, within SMc03157 at 3115.372 kb on - strand, within SMc03157 at 3115.372 kb on - strand, within SMc03157 at 3115.372 kb on - strand, within SMc03157 at 3115.626 kb on - strand, within SMc03158 at 3115.690 kb on - strand, within SMc03158 at 3116.172 kb on + strand at 3116.172 kb on + strand at 3116.172 kb on + strand at 3116.172 kb on + strand at 3116.173 kb on - strand at 3116.173 kb on - strand at 3116.173 kb on - strand at 3116.173 kb on - strand at 3116.224 kb on + strand at 3116.224 kb on + strand at 3116.225 kb on - strand at 3116.302 kb on + strand at 3116.302 kb on + strand at 3116.303 kb on - strand at 3116.627 kb on + strand, within SMc03159 at 3116.628 kb on - strand, within SMc03159 at 3117.203 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,114,602 + +0.8 3,114,603 - -0.3 3,114,704 - +0.4 3,114,715 + -0.6 3,114,811 + +0.6 3,115,190 + SMc03157 0.57 -1.1 3,115,190 + SMc03157 0.57 +0.2 3,115,191 - SMc03157 0.58 -0.1 3,115,191 - SMc03157 0.58 +0.2 3,115,205 - SMc03157 0.59 +1.8 3,115,348 + SMc03157 0.78 -0.3 3,115,348 + SMc03157 0.78 +0.8 3,115,349 - SMc03157 0.78 -0.1 3,115,349 - SMc03157 0.78 -1.2 3,115,369 + SMc03157 0.80 -0.3 3,115,371 + SMc03157 0.81 +0.1 3,115,371 + SMc03157 0.81 +1.0 3,115,371 + SMc03157 0.81 +0.2 3,115,372 - SMc03157 0.81 -0.1 3,115,372 - SMc03157 0.81 +0.2 3,115,372 - SMc03157 0.81 +1.0 3,115,626 - SMc03158 0.10 +1.4 3,115,690 - SMc03158 0.20 +0.3 3,116,172 + +0.4 3,116,172 + +0.2 3,116,172 + +0.3 3,116,172 + +0.4 3,116,173 - +1.3 3,116,173 - -0.0 3,116,173 - -0.3 3,116,173 - +0.2 3,116,224 + -0.2 3,116,224 + +1.0 3,116,225 - +0.0 3,116,302 + -0.8 3,116,302 + -0.7 3,116,303 - -0.7 3,116,627 + SMc03159 0.38 +0.3 3,116,628 - SMc03159 0.38 +0.6 3,117,203 + -0.1
Or see this region's nucleotide sequence