Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03096 and SMc03095 are separated by 142 nucleotides SMc03095 and SMc03094 are separated by 123 nucleotides SMc03094 and SMc03093 are separated by 41 nucleotides
SMc03096: SMc03096 - signal peptide protein, at 3,248,712 to 3,254,321
SMc03096
SMc03095: SMc03095 - hypothetical protein, at 3,254,464 to 3,254,832
SMc03095
SMc03094: SMc03094 - aminoglycoside 3'-phosphotransferase, at 3,254,956 to 3,255,741
SMc03094
SMc03093: SMc03093 - hypothetical protein, at 3,255,783 to 3,256,262
SMc03093
Position (kb)
3254
3255 Strain fitness (log2 ratio)
-2
-1
0
1 at 3254.316 kb on + strand at 3254.316 kb on + strand at 3254.316 kb on + strand at 3254.317 kb on - strand at 3254.384 kb on + strand at 3254.414 kb on - strand at 3254.478 kb on - strand at 3254.478 kb on - strand at 3254.635 kb on + strand, within SMc03095 at 3254.672 kb on + strand, within SMc03095 at 3254.672 kb on + strand, within SMc03095 at 3254.672 kb on + strand, within SMc03095 at 3254.830 kb on + strand at 3254.830 kb on + strand at 3254.830 kb on + strand at 3254.830 kb on + strand at 3254.830 kb on + strand at 3254.841 kb on + strand at 3254.878 kb on + strand at 3254.878 kb on + strand at 3254.935 kb on + strand at 3254.936 kb on - strand at 3254.944 kb on + strand at 3254.944 kb on + strand at 3254.944 kb on + strand at 3254.945 kb on - strand at 3254.945 kb on - strand at 3255.088 kb on - strand, within SMc03094 at 3255.168 kb on + strand, within SMc03094 at 3255.168 kb on + strand, within SMc03094 at 3255.169 kb on - strand, within SMc03094 at 3255.169 kb on - strand, within SMc03094 at 3255.501 kb on - strand, within SMc03094 at 3255.501 kb on - strand, within SMc03094 at 3255.598 kb on + strand, within SMc03094 at 3255.599 kb on - strand, within SMc03094 at 3255.599 kb on - strand, within SMc03094
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,254,316 + -1.9 3,254,316 + +0.9 3,254,316 + +1.0 3,254,317 - -0.1 3,254,384 + -0.2 3,254,414 - -1.4 3,254,478 - +0.9 3,254,478 - +0.1 3,254,635 + SMc03095 0.46 +0.0 3,254,672 + SMc03095 0.56 +1.3 3,254,672 + SMc03095 0.56 +0.1 3,254,672 + SMc03095 0.56 +0.5 3,254,830 + +0.4 3,254,830 + -1.5 3,254,830 + +0.5 3,254,830 + +0.4 3,254,830 + -1.2 3,254,841 + -0.1 3,254,878 + -0.5 3,254,878 + -0.3 3,254,935 + +1.2 3,254,936 - +0.1 3,254,944 + +0.0 3,254,944 + +0.9 3,254,944 + +0.5 3,254,945 - -0.0 3,254,945 - -0.1 3,255,088 - SMc03094 0.17 -0.5 3,255,168 + SMc03094 0.27 +0.1 3,255,168 + SMc03094 0.27 -0.2 3,255,169 - SMc03094 0.27 -0.1 3,255,169 - SMc03094 0.27 -0.2 3,255,501 - SMc03094 0.69 +0.2 3,255,501 - SMc03094 0.69 +0.4 3,255,598 + SMc03094 0.82 +0.2 3,255,599 - SMc03094 0.82 +0.0 3,255,599 - SMc03094 0.82 -0.1
Or see this region's nucleotide sequence