Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01763 and SMc01764 are separated by 3 nucleotides SMc01764 and SMc01765 are separated by 95 nucleotides SMc01765 and SMc01766 are separated by 82 nucleotides
SMc01763: SMc01763 - hypothetical protein, at 1,310,357 to 1,311,262
SMc01763
SMc01764: SMc01764 - arginyl-tRNA-protein transferase, at 1,311,266 to 1,312,045
SMc01764
SMc01765: SMc01765 - hypothetical protein, at 1,312,141 to 1,312,605
SMc01765
SMc01766: SMc01766 - delta-aminolevulinic acid dehydratase, at 1,312,688 to 1,313,830
SMc01766
Position (kb)
1312
1313 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1311.358 kb on + strand, within SMc01764 at 1311.358 kb on + strand, within SMc01764 at 1311.358 kb on + strand, within SMc01764 at 1311.358 kb on + strand, within SMc01764 at 1311.358 kb on + strand, within SMc01764 at 1311.358 kb on + strand, within SMc01764 at 1311.359 kb on - strand, within SMc01764 at 1311.360 kb on + strand, within SMc01764 at 1311.360 kb on + strand, within SMc01764 at 1311.361 kb on - strand, within SMc01764 at 1311.391 kb on - strand, within SMc01764 at 1311.400 kb on - strand, within SMc01764 at 1311.453 kb on + strand, within SMc01764 at 1311.453 kb on + strand, within SMc01764 at 1311.454 kb on - strand, within SMc01764 at 1311.498 kb on + strand, within SMc01764 at 1311.498 kb on + strand, within SMc01764 at 1311.499 kb on - strand, within SMc01764 at 1311.499 kb on - strand, within SMc01764 at 1311.601 kb on - strand, within SMc01764 at 1311.621 kb on - strand at 1311.621 kb on - strand, within SMc01764 at 1311.648 kb on + strand, within SMc01764 at 1311.648 kb on + strand, within SMc01764 at 1311.720 kb on + strand, within SMc01764 at 1311.721 kb on - strand, within SMc01764 at 1311.721 kb on - strand, within SMc01764 at 1311.825 kb on - strand, within SMc01764 at 1311.825 kb on - strand, within SMc01764 at 1311.946 kb on + strand, within SMc01764 at 1311.947 kb on - strand, within SMc01764 at 1311.956 kb on + strand, within SMc01764 at 1312.083 kb on + strand at 1312.086 kb on + strand at 1312.086 kb on + strand at 1312.131 kb on - strand at 1312.145 kb on + strand at 1312.145 kb on + strand at 1312.145 kb on + strand at 1312.146 kb on - strand at 1312.146 kb on - strand at 1312.146 kb on - strand at 1312.264 kb on + strand, within SMc01765 at 1312.508 kb on + strand, within SMc01765 at 1312.509 kb on - strand, within SMc01765 at 1312.593 kb on + strand at 1312.593 kb on + strand at 1312.593 kb on + strand at 1312.593 kb on + strand at 1312.593 kb on + strand at 1312.593 kb on + strand at 1312.624 kb on + strand at 1312.655 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,311,358 + SMc01764 0.12 +0.3 1,311,358 + SMc01764 0.12 +0.3 1,311,358 + SMc01764 0.12 -0.3 1,311,358 + SMc01764 0.12 -1.2 1,311,358 + SMc01764 0.12 -2.3 1,311,358 + SMc01764 0.12 +0.2 1,311,359 - SMc01764 0.12 -0.2 1,311,360 + SMc01764 0.12 +0.5 1,311,360 + SMc01764 0.12 +0.1 1,311,361 - SMc01764 0.12 -1.0 1,311,391 - SMc01764 0.16 -0.3 1,311,400 - SMc01764 0.17 +0.3 1,311,453 + SMc01764 0.24 +1.7 1,311,453 + SMc01764 0.24 -1.1 1,311,454 - SMc01764 0.24 +0.1 1,311,498 + SMc01764 0.30 -0.2 1,311,498 + SMc01764 0.30 +0.0 1,311,499 - SMc01764 0.30 -0.7 1,311,499 - SMc01764 0.30 -1.3 1,311,601 - SMc01764 0.43 -0.4 1,311,621 - +0.3 1,311,621 - SMc01764 0.46 +0.1 1,311,648 + SMc01764 0.49 -0.9 1,311,648 + SMc01764 0.49 -1.2 1,311,720 + SMc01764 0.58 -1.5 1,311,721 - SMc01764 0.58 -0.4 1,311,721 - SMc01764 0.58 -0.6 1,311,825 - SMc01764 0.72 -0.9 1,311,825 - SMc01764 0.72 +0.1 1,311,946 + SMc01764 0.87 +0.1 1,311,947 - SMc01764 0.87 +0.5 1,311,956 + SMc01764 0.88 +0.0 1,312,083 + -2.1 1,312,086 + +2.3 1,312,086 + +0.0 1,312,131 - -1.6 1,312,145 + -0.9 1,312,145 + +0.4 1,312,145 + +0.7 1,312,146 - -0.8 1,312,146 - +0.7 1,312,146 - +0.4 1,312,264 + SMc01765 0.26 +1.7 1,312,508 + SMc01765 0.79 +1.3 1,312,509 - SMc01765 0.79 +1.0 1,312,593 + -0.8 1,312,593 + +0.0 1,312,593 + +0.7 1,312,593 + +0.0 1,312,593 + +0.8 1,312,593 + +0.1 1,312,624 + +0.7 1,312,655 + +0.3
Or see this region's nucleotide sequence