Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01275 and SMc01274 are separated by 38 nucleotides SMc01274 and SMc01273 are separated by 33 nucleotides SMc01273 and SMc01272 are separated by 16 nucleotides
SMc01275: SMc01275 - ribosomal large subunit pseudouridine synthase C protein, at 1,500,544 to 1,501,536
SMc01275
SMc01274: SMc01274 - camphor resistance protein CrcB, at 1,501,575 to 1,501,952
SMc01274
SMc01273: SMc01273 - S-formylglutathione hydrolase, at 1,501,986 to 1,502,819
SMc01273
SMc01272: SMc01272 - hypothetical protein, at 1,502,836 to 1,503,495
SMc01272
Position (kb)
1501
1502 Strain fitness (log2 ratio)
-1
0
1
2 at 1500.661 kb on + strand, within SMc01275 at 1500.662 kb on - strand, within SMc01275 at 1500.662 kb on - strand, within SMc01275 at 1500.766 kb on - strand, within SMc01275 at 1500.807 kb on - strand, within SMc01275 at 1500.861 kb on - strand, within SMc01275 at 1500.864 kb on - strand, within SMc01275 at 1500.941 kb on - strand, within SMc01275 at 1501.002 kb on - strand, within SMc01275 at 1501.002 kb on - strand, within SMc01275 at 1501.079 kb on - strand, within SMc01275 at 1501.162 kb on + strand, within SMc01275 at 1501.163 kb on - strand, within SMc01275 at 1501.163 kb on - strand, within SMc01275 at 1501.163 kb on - strand, within SMc01275 at 1501.163 kb on - strand, within SMc01275 at 1501.165 kb on - strand, within SMc01275 at 1501.370 kb on - strand, within SMc01275 at 1501.370 kb on - strand, within SMc01275 at 1501.370 kb on - strand, within SMc01275 at 1501.370 kb on - strand, within SMc01275 at 1501.526 kb on - strand at 1501.526 kb on - strand at 1501.526 kb on - strand at 1501.646 kb on + strand, within SMc01274 at 1501.648 kb on + strand, within SMc01274 at 1501.648 kb on + strand, within SMc01274 at 1501.649 kb on - strand, within SMc01274 at 1501.649 kb on - strand, within SMc01274 at 1501.649 kb on - strand, within SMc01274 at 1501.649 kb on - strand, within SMc01274 at 1501.649 kb on - strand, within SMc01274 at 1501.724 kb on - strand, within SMc01274 at 1501.943 kb on + strand at 1501.943 kb on + strand at 1501.944 kb on - strand at 1501.944 kb on - strand at 1502.045 kb on - strand at 1502.047 kb on + strand at 1502.059 kb on + strand at 1502.081 kb on + strand, within SMc01273 at 1502.082 kb on - strand, within SMc01273 at 1502.150 kb on + strand, within SMc01273 at 1502.150 kb on + strand, within SMc01273 at 1502.222 kb on - strand, within SMc01273 at 1502.222 kb on - strand, within SMc01273 at 1502.222 kb on - strand, within SMc01273 at 1502.254 kb on + strand, within SMc01273 at 1502.254 kb on + strand, within SMc01273 at 1502.394 kb on - strand, within SMc01273 at 1502.456 kb on + strand, within SMc01273 at 1502.456 kb on + strand, within SMc01273 at 1502.457 kb on - strand, within SMc01273 at 1502.457 kb on - strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.458 kb on + strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.459 kb on - strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.464 kb on + strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.465 kb on - strand, within SMc01273 at 1502.580 kb on - strand, within SMc01273 at 1502.618 kb on + strand, within SMc01273 at 1502.618 kb on + strand, within SMc01273 at 1502.619 kb on - strand, within SMc01273 at 1502.677 kb on + strand, within SMc01273 at 1502.770 kb on + strand at 1502.811 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,500,661 + SMc01275 0.12 +0.1 1,500,662 - SMc01275 0.12 +0.0 1,500,662 - SMc01275 0.12 +0.8 1,500,766 - SMc01275 0.22 +0.7 1,500,807 - SMc01275 0.26 +0.9 1,500,861 - SMc01275 0.32 -0.5 1,500,864 - SMc01275 0.32 +0.5 1,500,941 - SMc01275 0.40 +0.4 1,501,002 - SMc01275 0.46 +0.0 1,501,002 - SMc01275 0.46 +1.0 1,501,079 - SMc01275 0.54 -0.6 1,501,162 + SMc01275 0.62 +0.9 1,501,163 - SMc01275 0.62 -0.3 1,501,163 - SMc01275 0.62 +0.0 1,501,163 - SMc01275 0.62 +0.8 1,501,163 - SMc01275 0.62 +0.5 1,501,165 - SMc01275 0.63 +0.5 1,501,370 - SMc01275 0.83 +1.3 1,501,370 - SMc01275 0.83 +0.2 1,501,370 - SMc01275 0.83 +0.9 1,501,370 - SMc01275 0.83 +1.0 1,501,526 - +0.2 1,501,526 - +0.2 1,501,526 - +0.7 1,501,646 + SMc01274 0.19 -0.7 1,501,648 + SMc01274 0.19 -0.1 1,501,648 + SMc01274 0.19 +0.2 1,501,649 - SMc01274 0.20 +0.5 1,501,649 - SMc01274 0.20 +1.0 1,501,649 - SMc01274 0.20 -0.4 1,501,649 - SMc01274 0.20 +1.0 1,501,649 - SMc01274 0.20 +1.4 1,501,724 - SMc01274 0.39 +0.8 1,501,943 + -0.4 1,501,943 + +0.6 1,501,944 - -0.3 1,501,944 - -0.1 1,502,045 - +0.5 1,502,047 + +0.3 1,502,059 + -1.2 1,502,081 + SMc01273 0.11 +1.2 1,502,082 - SMc01273 0.12 -0.2 1,502,150 + SMc01273 0.20 +0.4 1,502,150 + SMc01273 0.20 +0.2 1,502,222 - SMc01273 0.28 +1.2 1,502,222 - SMc01273 0.28 +0.2 1,502,222 - SMc01273 0.28 +0.5 1,502,254 + SMc01273 0.32 -0.1 1,502,254 + SMc01273 0.32 +0.3 1,502,394 - SMc01273 0.49 +0.3 1,502,456 + SMc01273 0.56 -1.1 1,502,456 + SMc01273 0.56 -0.8 1,502,457 - SMc01273 0.56 +0.4 1,502,457 - SMc01273 0.56 +0.4 1,502,458 + SMc01273 0.57 +0.3 1,502,458 + SMc01273 0.57 +0.9 1,502,458 + SMc01273 0.57 -0.3 1,502,458 + SMc01273 0.57 -0.2 1,502,458 + SMc01273 0.57 +0.2 1,502,458 + SMc01273 0.57 -0.6 1,502,458 + SMc01273 0.57 +0.6 1,502,458 + SMc01273 0.57 +0.1 1,502,458 + SMc01273 0.57 -0.8 1,502,459 - SMc01273 0.57 -0.1 1,502,459 - SMc01273 0.57 +0.4 1,502,459 - SMc01273 0.57 +0.3 1,502,459 - SMc01273 0.57 -0.1 1,502,464 + SMc01273 0.57 -0.0 1,502,464 + SMc01273 0.57 -0.0 1,502,464 + SMc01273 0.57 +0.5 1,502,464 + SMc01273 0.57 +0.1 1,502,464 + SMc01273 0.57 +0.0 1,502,464 + SMc01273 0.57 +0.2 1,502,464 + SMc01273 0.57 +0.1 1,502,464 + SMc01273 0.57 -0.1 1,502,464 + SMc01273 0.57 +0.6 1,502,465 - SMc01273 0.57 +1.8 1,502,465 - SMc01273 0.57 +0.2 1,502,465 - SMc01273 0.57 +0.1 1,502,465 - SMc01273 0.57 +0.4 1,502,465 - SMc01273 0.57 +0.4 1,502,580 - SMc01273 0.71 -0.4 1,502,618 + SMc01273 0.76 +0.3 1,502,618 + SMc01273 0.76 +0.3 1,502,619 - SMc01273 0.76 +0.0 1,502,677 + SMc01273 0.83 -0.2 1,502,770 + +0.7 1,502,811 + +0.3
Or see this region's nucleotide sequence