Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00508 and SMc00507 are separated by 221 nucleotides SMc00507 and SMc00506 are separated by 73 nucleotides
SMc00508: SMc00508 - adenylosuccinate lyase, at 1,903,904 to 1,905,211
SMc00508
SMc00507: SMc00507 - hypothetical protein, at 1,905,433 to 1,905,771
SMc00507
SMc00506: SMc00506 - hypothetical protein, at 1,905,845 to 1,906,654
SMc00506
Position (kb)
1905
1906 Strain fitness (log2 ratio)
-1
0
1 at 1905.214 kb on - strand at 1905.414 kb on + strand at 1905.415 kb on - strand at 1905.473 kb on - strand, within SMc00507 at 1905.473 kb on - strand, within SMc00507 at 1905.518 kb on + strand, within SMc00507 at 1905.751 kb on + strand at 1905.752 kb on - strand at 1905.755 kb on - strand at 1905.755 kb on - strand at 1905.883 kb on - strand at 1906.196 kb on - strand, within SMc00506 at 1906.226 kb on + strand, within SMc00506 at 1906.226 kb on + strand, within SMc00506 at 1906.226 kb on + strand, within SMc00506 at 1906.227 kb on - strand, within SMc00506 at 1906.228 kb on + strand, within SMc00506 at 1906.228 kb on + strand, within SMc00506 at 1906.228 kb on + strand, within SMc00506 at 1906.228 kb on + strand, within SMc00506 at 1906.229 kb on - strand, within SMc00506 at 1906.229 kb on - strand, within SMc00506 at 1906.229 kb on - strand, within SMc00506 at 1906.230 kb on + strand, within SMc00506 at 1906.230 kb on + strand, within SMc00506 at 1906.231 kb on - strand, within SMc00506 at 1906.231 kb on - strand, within SMc00506 at 1906.231 kb on - strand, within SMc00506 at 1906.231 kb on - strand, within SMc00506 at 1906.383 kb on + strand, within SMc00506 at 1906.500 kb on + strand, within SMc00506 at 1906.501 kb on - strand, within SMc00506 at 1906.502 kb on + strand, within SMc00506 at 1906.502 kb on + strand, within SMc00506 at 1906.502 kb on + strand, within SMc00506 at 1906.502 kb on + strand, within SMc00506 at 1906.502 kb on + strand, within SMc00506 at 1906.503 kb on - strand, within SMc00506 at 1906.503 kb on - strand, within SMc00506 at 1906.503 kb on - strand, within SMc00506 at 1906.599 kb on - strand at 1906.745 kb on + strand at 1906.745 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,905,214 - +0.5 1,905,414 + +0.2 1,905,415 - +0.2 1,905,473 - SMc00507 0.12 +0.8 1,905,473 - SMc00507 0.12 +0.6 1,905,518 + SMc00507 0.25 +0.1 1,905,751 + -0.5 1,905,752 - +0.7 1,905,755 - +0.4 1,905,755 - -0.4 1,905,883 - -0.1 1,906,196 - SMc00506 0.43 -0.3 1,906,226 + SMc00506 0.47 -0.2 1,906,226 + SMc00506 0.47 -0.7 1,906,226 + SMc00506 0.47 +0.8 1,906,227 - SMc00506 0.47 +0.2 1,906,228 + SMc00506 0.47 -0.3 1,906,228 + SMc00506 0.47 -0.7 1,906,228 + SMc00506 0.47 -0.0 1,906,228 + SMc00506 0.47 -0.3 1,906,229 - SMc00506 0.47 -0.2 1,906,229 - SMc00506 0.47 -0.2 1,906,229 - SMc00506 0.47 +0.9 1,906,230 + SMc00506 0.48 +0.0 1,906,230 + SMc00506 0.48 -0.3 1,906,231 - SMc00506 0.48 -0.3 1,906,231 - SMc00506 0.48 +0.0 1,906,231 - SMc00506 0.48 -0.9 1,906,231 - SMc00506 0.48 -1.2 1,906,383 + SMc00506 0.66 -0.2 1,906,500 + SMc00506 0.81 +0.4 1,906,501 - SMc00506 0.81 -0.5 1,906,502 + SMc00506 0.81 -0.9 1,906,502 + SMc00506 0.81 -0.1 1,906,502 + SMc00506 0.81 +0.3 1,906,502 + SMc00506 0.81 +0.5 1,906,502 + SMc00506 0.81 -0.5 1,906,503 - SMc00506 0.81 +0.2 1,906,503 - SMc00506 0.81 -0.6 1,906,503 - SMc00506 0.81 -0.3 1,906,599 - -0.0 1,906,745 + -1.2 1,906,745 + +0.7
Or see this region's nucleotide sequence