Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2193 and SMa2195 are separated by 0 nucleotides SMa2195 and SMa2197 are separated by 1 nucleotides SMa2197 and SMa2199 are separated by 63 nucleotides
SMa2193: SMa2193 - Oxidoreductase, at 1,228,832 to 1,230,145
SMa2193
SMa2195: SMa2195 - ABC transporter ATP-binding protein, at 1,230,146 to 1,230,910
SMa2195
SMa2197: SMa2197 - ABC transporter permease, at 1,230,912 to 1,231,826
SMa2197
SMa2199: SMa2199 - ABC transporter substrate-binding protein, at 1,231,890 to 1,232,780
SMa2199
Position (kb)
1230
1231 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1229.183 kb on + strand, within SMa2193 at 1229.183 kb on + strand, within SMa2193 at 1229.225 kb on + strand at 1229.242 kb on - strand, within SMa2193 at 1229.285 kb on - strand, within SMa2193 at 1229.286 kb on + strand, within SMa2193 at 1229.287 kb on - strand, within SMa2193 at 1229.294 kb on + strand, within SMa2193 at 1229.295 kb on - strand, within SMa2193 at 1229.348 kb on + strand, within SMa2193 at 1229.350 kb on + strand, within SMa2193 at 1229.350 kb on + strand, within SMa2193 at 1229.351 kb on - strand, within SMa2193 at 1229.351 kb on - strand, within SMa2193 at 1229.408 kb on + strand, within SMa2193 at 1229.408 kb on + strand, within SMa2193 at 1229.454 kb on - strand, within SMa2193 at 1229.454 kb on - strand, within SMa2193 at 1229.476 kb on - strand, within SMa2193 at 1229.630 kb on + strand, within SMa2193 at 1229.636 kb on + strand, within SMa2193 at 1229.720 kb on - strand, within SMa2193 at 1229.726 kb on - strand, within SMa2193 at 1229.850 kb on - strand, within SMa2193 at 1229.921 kb on + strand, within SMa2193 at 1230.039 kb on - strand at 1230.044 kb on + strand at 1230.044 kb on + strand at 1230.045 kb on - strand at 1230.057 kb on + strand at 1230.057 kb on + strand at 1230.057 kb on + strand at 1230.057 kb on + strand at 1230.057 kb on + strand at 1230.058 kb on - strand at 1230.058 kb on - strand at 1230.094 kb on + strand at 1230.094 kb on + strand at 1230.244 kb on + strand, within SMa2195 at 1230.404 kb on - strand, within SMa2195 at 1230.472 kb on - strand, within SMa2195 at 1230.802 kb on + strand, within SMa2195 at 1230.808 kb on + strand, within SMa2195 at 1230.879 kb on - strand at 1230.953 kb on + strand at 1231.088 kb on + strand, within SMa2197 at 1231.088 kb on + strand, within SMa2197 at 1231.089 kb on - strand, within SMa2197 at 1231.206 kb on + strand, within SMa2197 at 1231.206 kb on + strand, within SMa2197 at 1231.313 kb on + strand, within SMa2197 at 1231.314 kb on - strand, within SMa2197 at 1231.314 kb on - strand, within SMa2197 at 1231.314 kb on - strand, within SMa2197 at 1231.315 kb on + strand, within SMa2197 at 1231.315 kb on + strand, within SMa2197 at 1231.315 kb on + strand, within SMa2197 at 1231.315 kb on + strand, within SMa2197 at 1231.315 kb on + strand, within SMa2197 at 1231.316 kb on - strand, within SMa2197 at 1231.316 kb on - strand, within SMa2197 at 1231.316 kb on - strand, within SMa2197 at 1231.570 kb on - strand, within SMa2197 at 1231.648 kb on + strand, within SMa2197 at 1231.649 kb on - strand, within SMa2197 at 1231.659 kb on + strand, within SMa2197 at 1231.705 kb on + strand, within SMa2197 at 1231.713 kb on + strand, within SMa2197 at 1231.768 kb on + strand at 1231.769 kb on - strand at 1231.769 kb on - strand at 1231.892 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,229,183 + SMa2193 0.27 -0.1 1,229,183 + SMa2193 0.27 +0.6 1,229,225 + -0.2 1,229,242 - SMa2193 0.31 +0.2 1,229,285 - SMa2193 0.34 +0.1 1,229,286 + SMa2193 0.35 +0.0 1,229,287 - SMa2193 0.35 +2.1 1,229,294 + SMa2193 0.35 -0.3 1,229,295 - SMa2193 0.35 -1.2 1,229,348 + SMa2193 0.39 +0.2 1,229,350 + SMa2193 0.39 +0.2 1,229,350 + SMa2193 0.39 -0.3 1,229,351 - SMa2193 0.39 -0.7 1,229,351 - SMa2193 0.39 -0.3 1,229,408 + SMa2193 0.44 -0.8 1,229,408 + SMa2193 0.44 +0.7 1,229,454 - SMa2193 0.47 +0.1 1,229,454 - SMa2193 0.47 +0.2 1,229,476 - SMa2193 0.49 +0.0 1,229,630 + SMa2193 0.61 -0.6 1,229,636 + SMa2193 0.61 +0.5 1,229,720 - SMa2193 0.68 -0.3 1,229,726 - SMa2193 0.68 -0.4 1,229,850 - SMa2193 0.77 -0.8 1,229,921 + SMa2193 0.83 -0.5 1,230,039 - +0.2 1,230,044 + +0.1 1,230,044 + -0.0 1,230,045 - -0.5 1,230,057 + +0.4 1,230,057 + +1.8 1,230,057 + -0.3 1,230,057 + -0.2 1,230,057 + -0.4 1,230,058 - -0.1 1,230,058 - -0.1 1,230,094 + -0.3 1,230,094 + +0.3 1,230,244 + SMa2195 0.13 -0.0 1,230,404 - SMa2195 0.34 -0.1 1,230,472 - SMa2195 0.43 +0.4 1,230,802 + SMa2195 0.86 +0.6 1,230,808 + SMa2195 0.87 +0.6 1,230,879 - -0.2 1,230,953 + -0.4 1,231,088 + SMa2197 0.19 -0.3 1,231,088 + SMa2197 0.19 +1.0 1,231,089 - SMa2197 0.19 -0.2 1,231,206 + SMa2197 0.32 -0.8 1,231,206 + SMa2197 0.32 +1.1 1,231,313 + SMa2197 0.44 -0.6 1,231,314 - SMa2197 0.44 +1.0 1,231,314 - SMa2197 0.44 +0.1 1,231,314 - SMa2197 0.44 +0.6 1,231,315 + SMa2197 0.44 -0.1 1,231,315 + SMa2197 0.44 -0.6 1,231,315 + SMa2197 0.44 +0.1 1,231,315 + SMa2197 0.44 +0.9 1,231,315 + SMa2197 0.44 +0.1 1,231,316 - SMa2197 0.44 -0.6 1,231,316 - SMa2197 0.44 +1.1 1,231,316 - SMa2197 0.44 -0.6 1,231,570 - SMa2197 0.72 +0.4 1,231,648 + SMa2197 0.80 -0.4 1,231,649 - SMa2197 0.81 -0.1 1,231,659 + SMa2197 0.82 +0.1 1,231,705 + SMa2197 0.87 +0.4 1,231,713 + SMa2197 0.88 +0.1 1,231,768 + -0.1 1,231,769 - +0.2 1,231,769 - +0.0 1,231,892 - -1.9
Or see this region's nucleotide sequence