Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2167 and SMa2168 are separated by 76 nucleotides SMa2168 and SMa2169 are separated by 38 nucleotides SMa2169 and SMa2171 are separated by 453 nucleotides
SMa2167: SMa2167 - hypothetical protein, at 1,221,480 to 1,221,947
SMa2167
SMa2168: SMa2168 - tRNA-Met, at 1,222,024 to 1,222,096
SMa2168
SMa2169: SMa2169 - hypothetical protein, at 1,222,135 to 1,222,512
SMa2169
SMa2171: SMa2171 - Transposase, at 1,222,966 to 1,224,603
SMa2171
Position (kb)
1222
1223 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1221.155 kb on + strand at 1221.155 kb on + strand at 1221.155 kb on + strand at 1221.163 kb on + strand at 1221.164 kb on - strand at 1221.237 kb on + strand at 1221.296 kb on - strand at 1221.300 kb on + strand at 1221.300 kb on + strand at 1221.321 kb on + strand at 1221.321 kb on + strand at 1221.322 kb on - strand at 1221.390 kb on + strand at 1221.442 kb on + strand at 1221.448 kb on + strand at 1221.448 kb on + strand at 1221.448 kb on + strand at 1221.449 kb on - strand at 1221.449 kb on - strand at 1221.449 kb on - strand at 1221.521 kb on + strand at 1221.521 kb on + strand at 1221.541 kb on + strand, within SMa2167 at 1221.545 kb on + strand, within SMa2167 at 1221.545 kb on + strand, within SMa2167 at 1221.624 kb on - strand, within SMa2167 at 1221.624 kb on - strand, within SMa2167 at 1221.624 kb on - strand, within SMa2167 at 1221.624 kb on - strand, within SMa2167 at 1221.624 kb on - strand, within SMa2167 at 1221.624 kb on - strand, within SMa2167 at 1221.629 kb on - strand, within SMa2167 at 1221.629 kb on - strand, within SMa2167 at 1221.629 kb on - strand, within SMa2167 at 1221.775 kb on + strand, within SMa2167 at 1221.850 kb on - strand, within SMa2167 at 1222.032 kb on - strand, within SMa2168 at 1222.032 kb on - strand, within SMa2168 at 1222.136 kb on + strand at 1222.136 kb on + strand at 1222.136 kb on + strand at 1222.136 kb on + strand at 1222.136 kb on + strand at 1222.137 kb on - strand at 1222.189 kb on + strand, within SMa2169 at 1222.233 kb on - strand, within SMa2169 at 1222.302 kb on + strand, within SMa2169 at 1222.302 kb on + strand, within SMa2169 at 1222.309 kb on - strand, within SMa2169 at 1222.309 kb on - strand, within SMa2169 at 1222.309 kb on - strand, within SMa2169 at 1222.551 kb on + strand at 1222.563 kb on + strand at 1222.564 kb on - strand at 1222.564 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,221,155 + -0.4 1,221,155 + -0.8 1,221,155 + -0.2 1,221,163 + -1.0 1,221,164 - -0.3 1,221,237 + -0.2 1,221,296 - +0.6 1,221,300 + -0.5 1,221,300 + +0.1 1,221,321 + +0.8 1,221,321 + -0.1 1,221,322 - -0.7 1,221,390 + +0.2 1,221,442 + +1.6 1,221,448 + +0.2 1,221,448 + +1.8 1,221,448 + -0.6 1,221,449 - +0.0 1,221,449 - -0.2 1,221,449 - -1.1 1,221,521 + +0.2 1,221,521 + -1.1 1,221,541 + SMa2167 0.13 -0.5 1,221,545 + SMa2167 0.14 +0.8 1,221,545 + SMa2167 0.14 -0.0 1,221,624 - SMa2167 0.31 -0.0 1,221,624 - SMa2167 0.31 -0.0 1,221,624 - SMa2167 0.31 -0.1 1,221,624 - SMa2167 0.31 +0.5 1,221,624 - SMa2167 0.31 +0.5 1,221,624 - SMa2167 0.31 +0.1 1,221,629 - SMa2167 0.32 -0.5 1,221,629 - SMa2167 0.32 +0.3 1,221,629 - SMa2167 0.32 -2.0 1,221,775 + SMa2167 0.63 -0.0 1,221,850 - SMa2167 0.79 -0.3 1,222,032 - SMa2168 0.11 +0.4 1,222,032 - SMa2168 0.11 -0.6 1,222,136 + -0.2 1,222,136 + +0.8 1,222,136 + -0.1 1,222,136 + -0.2 1,222,136 + -0.1 1,222,137 - -0.3 1,222,189 + SMa2169 0.14 -0.5 1,222,233 - SMa2169 0.26 +0.4 1,222,302 + SMa2169 0.44 +0.2 1,222,302 + SMa2169 0.44 +0.8 1,222,309 - SMa2169 0.46 +0.8 1,222,309 - SMa2169 0.46 +0.3 1,222,309 - SMa2169 0.46 +0.1 1,222,551 + -0.0 1,222,563 + -0.4 1,222,564 - -0.6 1,222,564 - +0.7
Or see this region's nucleotide sequence