Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1358 and SMa1361 are separated by 320 nucleotides SMa1361 and SMa1362 are separated by 408 nucleotides
SMa1358: SMa1358 - Lyase, at 744,913 to 745,287
SMa1358
SMa1361: SMa1361 - hypothetical protein, at 745,608 to 745,790
SMa1361
SMa1362: SMa1362 - inner-membrane permease, at 746,199 to 747,599
SMa1362
Position (kb)
745
746 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 744.617 kb on + strand at 744.620 kb on + strand at 744.860 kb on + strand at 744.860 kb on + strand at 744.860 kb on + strand at 744.861 kb on - strand at 744.873 kb on + strand at 744.874 kb on - strand at 744.896 kb on + strand at 744.896 kb on + strand at 744.897 kb on - strand at 744.897 kb on - strand at 744.946 kb on + strand at 744.995 kb on + strand, within SMa1358 at 745.070 kb on - strand, within SMa1358 at 745.070 kb on - strand, within SMa1358 at 745.205 kb on - strand, within SMa1358 at 745.217 kb on - strand, within SMa1358 at 745.217 kb on - strand, within SMa1358 at 745.217 kb on - strand, within SMa1358 at 745.219 kb on + strand, within SMa1358 at 745.220 kb on - strand, within SMa1358 at 745.220 kb on - strand, within SMa1358 at 745.220 kb on - strand, within SMa1358 at 745.325 kb on + strand at 745.325 kb on + strand at 745.325 kb on + strand at 745.325 kb on + strand at 745.326 kb on - strand at 745.326 kb on - strand at 745.326 kb on - strand at 745.467 kb on + strand at 745.563 kb on - strand at 745.581 kb on - strand at 745.591 kb on - strand at 745.609 kb on + strand at 745.610 kb on - strand at 745.729 kb on + strand, within SMa1361 at 745.729 kb on + strand, within SMa1361 at 745.730 kb on - strand, within SMa1361 at 745.773 kb on - strand at 745.773 kb on - strand at 745.870 kb on + strand at 745.870 kb on + strand at 745.871 kb on - strand at 745.956 kb on + strand at 745.957 kb on - strand at 745.957 kb on - strand at 746.140 kb on - strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.340 kb on + strand, within SMa1362 at 746.341 kb on - strand, within SMa1362 at 746.487 kb on - strand, within SMa1362 at 746.488 kb on + strand, within SMa1362 at 746.488 kb on + strand, within SMa1362 at 746.489 kb on - strand, within SMa1362 at 746.535 kb on + strand, within SMa1362 at 746.607 kb on + strand, within SMa1362 at 746.607 kb on + strand, within SMa1362 at 746.654 kb on - strand, within SMa1362
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 744,617 + +0.9 744,620 + -0.0 744,860 + -0.2 744,860 + -0.2 744,860 + -0.1 744,861 - -0.3 744,873 + -0.1 744,874 - -0.4 744,896 + -0.4 744,896 + +1.3 744,897 - +0.1 744,897 - -0.4 744,946 + +0.2 744,995 + SMa1358 0.22 +0.1 745,070 - SMa1358 0.42 -0.0 745,070 - SMa1358 0.42 +0.0 745,205 - SMa1358 0.78 -1.4 745,217 - SMa1358 0.81 -0.2 745,217 - SMa1358 0.81 -0.8 745,217 - SMa1358 0.81 -0.7 745,219 + SMa1358 0.82 -0.2 745,220 - SMa1358 0.82 -0.2 745,220 - SMa1358 0.82 +0.2 745,220 - SMa1358 0.82 -1.6 745,325 + +0.1 745,325 + +0.2 745,325 + +0.2 745,325 + -0.3 745,326 - -0.0 745,326 - -0.0 745,326 - -0.1 745,467 + -0.1 745,563 - +0.9 745,581 - -0.6 745,591 - -0.2 745,609 + -0.9 745,610 - -2.7 745,729 + SMa1361 0.66 -0.2 745,729 + SMa1361 0.66 +0.9 745,730 - SMa1361 0.67 +0.2 745,773 - +0.1 745,773 - -0.5 745,870 + +0.1 745,870 + +0.8 745,871 - -1.2 745,956 + +0.6 745,957 - +0.2 745,957 - -0.5 746,140 - +0.0 746,200 + +0.3 746,200 + -1.7 746,200 + -0.2 746,200 + +0.3 746,200 + +2.0 746,340 + SMa1362 0.10 +0.8 746,341 - SMa1362 0.10 -0.1 746,487 - SMa1362 0.21 -0.2 746,488 + SMa1362 0.21 -0.5 746,488 + SMa1362 0.21 +0.6 746,489 - SMa1362 0.21 -0.2 746,535 + SMa1362 0.24 +0.8 746,607 + SMa1362 0.29 +0.1 746,607 + SMa1362 0.29 -0.2 746,654 - SMa1362 0.32 -0.8
Or see this region's nucleotide sequence