Strain Fitness in Sinorhizobium meliloti 1021 around SMa0754

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMa0753 and SMa0754 are separated by 283 nucleotides SMa0753: SMa0753 - hypothetical protein, at 406,804 to 407,496 SMa0753 SMa0754: SMa0754 - hypothetical protein, at 407,780 to 408,106 SMa0754 Position (kb) 407 408 409Strain fitness (log2 ratio) -2 -1 0 1at 406.930 kb on - strand, within SMa0753at 407.543 kb on + strandat 407.543 kb on + strandat 407.543 kb on + strandat 407.595 kb on + strandat 407.595 kb on + strandat 407.595 kb on + strandat 407.596 kb on - strandat 407.596 kb on - strandat 407.596 kb on - strandat 407.600 kb on - strandat 407.600 kb on - strandat 407.600 kb on - strandat 407.600 kb on - strandat 407.646 kb on + strandat 407.646 kb on + strandat 407.646 kb on + strandat 407.646 kb on + strandat 407.647 kb on - strandat 407.647 kb on - strandat 407.647 kb on - strandat 407.961 kb on - strand, within SMa0754at 408.035 kb on - strand, within SMa0754at 408.195 kb on + strandat 408.275 kb on + strandat 408.308 kb on + strandat 408.309 kb on - strandat 408.386 kb on - strandat 408.475 kb on + strandat 408.476 kb on - strandat 408.501 kb on - strandat 408.508 kb on + strandat 408.508 kb on + strandat 408.508 kb on + strandat 408.526 kb on + strandat 408.551 kb on - strandat 408.551 kb on - strandat 408.551 kb on - strandat 408.583 kb on + strandat 408.644 kb on - strandat 408.644 kb on - strandat 408.875 kb on + strandat 408.884 kb on - strandat 408.884 kb on - strandat 408.886 kb on + strandat 408.887 kb on - strandat 408.908 kb on - strandat 408.925 kb on + strandat 408.998 kb on + strandat 408.999 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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406,930 - SMa0753 0.18 -0.5
407,543 + +0.2
407,543 + +0.1
407,543 + -0.3
407,595 + +0.6
407,595 + -0.0
407,595 + -0.3
407,596 - +1.0
407,596 - +0.9
407,596 - -1.1
407,600 - +0.2
407,600 - -1.3
407,600 - -0.7
407,600 - -0.2
407,646 + +0.7
407,646 + -1.8
407,646 + -0.1
407,646 + +0.0
407,647 - +0.2
407,647 - -0.7
407,647 - +0.9
407,961 - SMa0754 0.55 -0.1
408,035 - SMa0754 0.78 +1.3
408,195 + +0.3
408,275 + +0.3
408,308 + -0.5
408,309 - -0.5
408,386 - +0.3
408,475 + -1.1
408,476 - -0.2
408,501 - +0.3
408,508 + +0.4
408,508 + -0.3
408,508 + -0.6
408,526 + -0.5
408,551 - +0.6
408,551 - +0.8
408,551 - +0.2
408,583 + -0.1
408,644 - -0.5
408,644 - -0.3
408,875 + -0.5
408,884 - -0.8
408,884 - +0.9
408,886 + -0.1
408,887 - -0.1
408,908 - -0.6
408,925 + +0.4
408,998 + -0.2
408,999 - +0.5

Or see this region's nucleotide sequence