Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37070

Experiment: R2A with Nickel (II) chloride 0.35 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt RR42_RS37070: RR42_RS37070 - hypothetical protein, at 3,776,555 to 3,776,851 _RS37070 Position (kb) 3776 3777Strain fitness (log2 ratio) -2 -1 0 1at 3775.564 kb on + strandat 3775.564 kb on + strandat 3775.565 kb on - strandat 3775.565 kb on - strandat 3775.565 kb on - strandat 3775.601 kb on + strandat 3775.601 kb on + strandat 3775.601 kb on + strandat 3775.601 kb on + strandat 3775.602 kb on - strandat 3775.671 kb on + strandat 3775.671 kb on + strandat 3775.697 kb on + strandat 3775.707 kb on + strandat 3775.820 kb on + strandat 3775.844 kb on + strandat 3775.845 kb on - strandat 3775.852 kb on + strandat 3775.852 kb on + strandat 3775.852 kb on + strandat 3775.852 kb on + strandat 3775.852 kb on + strandat 3775.853 kb on - strandat 3775.853 kb on - strandat 3775.853 kb on - strandat 3775.853 kb on - strandat 3775.853 kb on - strandat 3775.853 kb on - strandat 3775.853 kb on - strandat 3775.896 kb on + strandat 3775.896 kb on + strandat 3775.900 kb on + strandat 3775.901 kb on - strandat 3775.915 kb on + strandat 3775.915 kb on + strandat 3775.915 kb on + strandat 3775.915 kb on + strandat 3775.916 kb on - strandat 3775.916 kb on - strandat 3775.916 kb on - strandat 3776.010 kb on - strandat 3776.021 kb on - strandat 3776.108 kb on + strandat 3776.109 kb on - strandat 3776.195 kb on + strandat 3776.196 kb on - strandat 3776.196 kb on - strandat 3776.196 kb on - strandat 3776.234 kb on - strandat 3776.260 kb on - strandat 3776.319 kb on - strandat 3776.364 kb on + strandat 3776.364 kb on + strandat 3776.364 kb on + strandat 3776.364 kb on + strandat 3776.364 kb on + strandat 3776.365 kb on - strandat 3776.365 kb on - strandat 3776.365 kb on - strandat 3776.372 kb on + strandat 3776.373 kb on - strandat 3776.442 kb on + strandat 3776.544 kb on - strandat 3776.603 kb on + strand, within RR42_RS37070at 3776.629 kb on + strand, within RR42_RS37070at 3776.642 kb on - strand, within RR42_RS37070at 3776.673 kb on - strand, within RR42_RS37070at 3776.700 kb on + strand, within RR42_RS37070at 3776.701 kb on - strand, within RR42_RS37070at 3776.736 kb on - strand, within RR42_RS37070at 3776.831 kb on + strandat 3776.866 kb on + strandat 3776.926 kb on + strandat 3776.982 kb on + strandat 3777.063 kb on + strandat 3777.293 kb on - strandat 3777.396 kb on - strandat 3777.451 kb on - strandat 3777.541 kb on - strandat 3777.618 kb on - strandat 3777.702 kb on - strandat 3777.826 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with Nickel (II) chloride 0.35 mM
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3,775,564 + +0.1
3,775,564 + -0.6
3,775,565 - -0.1
3,775,565 - +0.0
3,775,565 - -0.4
3,775,601 + -0.6
3,775,601 + +0.4
3,775,601 + +0.3
3,775,601 + -0.5
3,775,602 - -0.9
3,775,671 + +0.1
3,775,671 + -0.3
3,775,697 + -0.1
3,775,707 + -1.5
3,775,820 + +0.4
3,775,844 + -1.2
3,775,845 - -0.2
3,775,852 + -2.0
3,775,852 + -0.3
3,775,852 + -0.9
3,775,852 + -1.0
3,775,852 + -0.3
3,775,853 - +0.8
3,775,853 - -0.6
3,775,853 - +0.3
3,775,853 - +0.1
3,775,853 - +0.8
3,775,853 - +0.8
3,775,853 - +0.8
3,775,896 + -0.3
3,775,896 + -1.4
3,775,900 + +0.3
3,775,901 - -0.2
3,775,915 + +0.3
3,775,915 + +0.8
3,775,915 + -0.2
3,775,915 + +0.1
3,775,916 - +0.0
3,775,916 - +0.5
3,775,916 - -0.4
3,776,010 - +0.7
3,776,021 - +0.6
3,776,108 + -1.0
3,776,109 - -0.8
3,776,195 + +0.4
3,776,196 - -1.0
3,776,196 - -0.1
3,776,196 - -0.9
3,776,234 - -0.6
3,776,260 - +0.6
3,776,319 - -0.7
3,776,364 + -0.3
3,776,364 + -0.6
3,776,364 + -0.5
3,776,364 + +0.3
3,776,364 + -0.6
3,776,365 - +0.1
3,776,365 - -0.7
3,776,365 - -1.6
3,776,372 + -0.1
3,776,373 - -1.5
3,776,442 + +0.9
3,776,544 - +0.3
3,776,603 + RR42_RS37070 0.16 +0.6
3,776,629 + RR42_RS37070 0.25 +1.4
3,776,642 - RR42_RS37070 0.29 -0.3
3,776,673 - RR42_RS37070 0.40 -1.6
3,776,700 + RR42_RS37070 0.49 +0.5
3,776,701 - RR42_RS37070 0.49 -0.2
3,776,736 - RR42_RS37070 0.61 +1.3
3,776,831 + +1.4
3,776,866 + -0.6
3,776,926 + -0.5
3,776,982 + -0.1
3,777,063 + +1.4
3,777,293 - -0.1
3,777,396 - +0.9
3,777,451 - -0.1
3,777,541 - +0.5
3,777,618 - -0.0
3,777,702 - -2.1
3,777,826 + +0.8

Or see this region's nucleotide sequence