Experiment: R2A with Nickel (II) chloride 0.35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
RR42_RS37070: RR42_RS37070 - hypothetical protein, at 3,776,555 to 3,776,851
_RS37070
Position (kb)
3776
3777 Strain fitness (log2 ratio)
-2
-1
0
1 at 3775.564 kb on + strand at 3775.564 kb on + strand at 3775.565 kb on - strand at 3775.565 kb on - strand at 3775.565 kb on - strand at 3775.601 kb on + strand at 3775.601 kb on + strand at 3775.601 kb on + strand at 3775.601 kb on + strand at 3775.602 kb on - strand at 3775.671 kb on + strand at 3775.671 kb on + strand at 3775.697 kb on + strand at 3775.707 kb on + strand at 3775.820 kb on + strand at 3775.844 kb on + strand at 3775.845 kb on - strand at 3775.852 kb on + strand at 3775.852 kb on + strand at 3775.852 kb on + strand at 3775.852 kb on + strand at 3775.852 kb on + strand at 3775.853 kb on - strand at 3775.853 kb on - strand at 3775.853 kb on - strand at 3775.853 kb on - strand at 3775.853 kb on - strand at 3775.853 kb on - strand at 3775.853 kb on - strand at 3775.896 kb on + strand at 3775.896 kb on + strand at 3775.900 kb on + strand at 3775.901 kb on - strand at 3775.915 kb on + strand at 3775.915 kb on + strand at 3775.915 kb on + strand at 3775.915 kb on + strand at 3775.916 kb on - strand at 3775.916 kb on - strand at 3775.916 kb on - strand at 3776.010 kb on - strand at 3776.021 kb on - strand at 3776.108 kb on + strand at 3776.109 kb on - strand at 3776.195 kb on + strand at 3776.196 kb on - strand at 3776.196 kb on - strand at 3776.196 kb on - strand at 3776.234 kb on - strand at 3776.260 kb on - strand at 3776.319 kb on - strand at 3776.364 kb on + strand at 3776.364 kb on + strand at 3776.364 kb on + strand at 3776.364 kb on + strand at 3776.364 kb on + strand at 3776.365 kb on - strand at 3776.365 kb on - strand at 3776.365 kb on - strand at 3776.372 kb on + strand at 3776.373 kb on - strand at 3776.442 kb on + strand at 3776.544 kb on - strand at 3776.603 kb on + strand, within RR42_RS37070 at 3776.629 kb on + strand, within RR42_RS37070 at 3776.642 kb on - strand, within RR42_RS37070 at 3776.673 kb on - strand, within RR42_RS37070 at 3776.700 kb on + strand, within RR42_RS37070 at 3776.701 kb on - strand, within RR42_RS37070 at 3776.736 kb on - strand, within RR42_RS37070 at 3776.831 kb on + strand at 3776.866 kb on + strand at 3776.926 kb on + strand at 3776.982 kb on + strand at 3777.063 kb on + strand at 3777.293 kb on - strand at 3777.396 kb on - strand at 3777.451 kb on - strand at 3777.541 kb on - strand at 3777.618 kb on - strand at 3777.702 kb on - strand at 3777.826 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Nickel (II) chloride 0.35 mM remove 3,775,564 + +0.1 3,775,564 + -0.6 3,775,565 - -0.1 3,775,565 - +0.0 3,775,565 - -0.4 3,775,601 + -0.6 3,775,601 + +0.4 3,775,601 + +0.3 3,775,601 + -0.5 3,775,602 - -0.9 3,775,671 + +0.1 3,775,671 + -0.3 3,775,697 + -0.1 3,775,707 + -1.5 3,775,820 + +0.4 3,775,844 + -1.2 3,775,845 - -0.2 3,775,852 + -2.0 3,775,852 + -0.3 3,775,852 + -0.9 3,775,852 + -1.0 3,775,852 + -0.3 3,775,853 - +0.8 3,775,853 - -0.6 3,775,853 - +0.3 3,775,853 - +0.1 3,775,853 - +0.8 3,775,853 - +0.8 3,775,853 - +0.8 3,775,896 + -0.3 3,775,896 + -1.4 3,775,900 + +0.3 3,775,901 - -0.2 3,775,915 + +0.3 3,775,915 + +0.8 3,775,915 + -0.2 3,775,915 + +0.1 3,775,916 - +0.0 3,775,916 - +0.5 3,775,916 - -0.4 3,776,010 - +0.7 3,776,021 - +0.6 3,776,108 + -1.0 3,776,109 - -0.8 3,776,195 + +0.4 3,776,196 - -1.0 3,776,196 - -0.1 3,776,196 - -0.9 3,776,234 - -0.6 3,776,260 - +0.6 3,776,319 - -0.7 3,776,364 + -0.3 3,776,364 + -0.6 3,776,364 + -0.5 3,776,364 + +0.3 3,776,364 + -0.6 3,776,365 - +0.1 3,776,365 - -0.7 3,776,365 - -1.6 3,776,372 + -0.1 3,776,373 - -1.5 3,776,442 + +0.9 3,776,544 - +0.3 3,776,603 + RR42_RS37070 0.16 +0.6 3,776,629 + RR42_RS37070 0.25 +1.4 3,776,642 - RR42_RS37070 0.29 -0.3 3,776,673 - RR42_RS37070 0.40 -1.6 3,776,700 + RR42_RS37070 0.49 +0.5 3,776,701 - RR42_RS37070 0.49 -0.2 3,776,736 - RR42_RS37070 0.61 +1.3 3,776,831 + +1.4 3,776,866 + -0.6 3,776,926 + -0.5 3,776,982 + -0.1 3,777,063 + +1.4 3,777,293 - -0.1 3,777,396 - +0.9 3,777,451 - -0.1 3,777,541 - +0.5 3,777,618 - -0.0 3,777,702 - -2.1 3,777,826 + +0.8
Or see this region's nucleotide sequence