Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06090

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,372,343	+				-0.5
1,372,379	+				+0.6
1,372,379	+				-0.9
1,372,379	+				-0.4
1,372,389	+				-3.6
1,372,389	+				+1.3
1,372,389	+				+1.4
1,372,389	+				-0.7
1,372,389	+				+0.1
1,372,389	+				-1.2
1,372,395	-				+0.6
1,372,397	-				-0.4
1,372,397	-				+0.7
1,372,397	-				-0.1
1,372,404	+				-0.3
1,372,404	+				-0.3
1,372,404	+				-0.4
1,372,404	+				-1.1
1,372,409	+				-0.8
1,372,410	+				-0.3
1,372,410	+				+0.3
1,372,410	+				+0.3
1,372,412	-				-1.8
1,372,412	-				+3.5
1,372,412	-				-1.1
1,372,412	-				-0.8
1,372,412	-				+0.2
1,372,412	-				-0.1
1,372,412	-				-0.1
1,372,412	-				-0.5
1,372,412	-				+0.5
1,372,412	-				+0.5
1,372,412	-				+0.2
1,372,412	-				-0.3
1,372,417	+				-0.0
1,372,417	+				-1.1
1,372,417	+				+0.7
1,372,417	+				-0.0
1,372,417	+				-0.2
1,372,417	-				-0.4
1,372,418	-				-0.1
1,372,418	-				-0.8
1,372,425	-				+1.9
1,372,425	-				+0.9
1,372,425	-				+0.2
1,372,425	-				+0.1
1,372,426	-				-1.3
1,372,440	-				-1.3
1,372,445	-				+1.5
1,372,445	-				+0.9
1,372,445	-				+0.6
1,372,445	-				+0.1
1,372,450	-				-0.4
1,372,516	+				-0.1
1,372,518	-				+0.6
1,372,520	+				+0.6
1,372,521	+				-0.3
1,372,523	-				-0.4
1,372,524	+				+0.2
1,372,524	-				+0.1
1,372,524	-				-0.1
1,372,528	+				-0.2
1,372,528	+				-0.6
1,372,528	-				+0.2
1,372,530	+				+0.7
1,372,530	+				-0.6
1,372,530	+				+0.7
1,372,533	+				+0.2
1,372,533	+				+0.3
1,372,533	+				+0.5
1,372,533	+				-0.9
1,372,533	-				-0.2
1,372,535	+				+0.0
1,372,536	-				-0.0
1,372,536	-				-1.5
1,372,536	-				-0.3
1,372,536	-				+0.4
1,372,538	-				+4.2
1,372,538	-				+0.6
1,372,538	-				+1.2
1,372,538	-				+0.1
1,372,538	-				-0.3
1,372,538	-				-2.8
1,372,538	-				-0.1
1,372,544	+				+0.1
1,372,548	-				+2.1
1,372,554	-				-2.2
1,372,572	+				+0.1
1,372,578	+				+0.1
1,372,578	+				-1.1
1,372,578	+				+0.9
1,372,578	+				-0.7
1,372,583	+				+0.9
1,372,586	-				+0.0
1,372,591	-				-0.4
1,372,591	-				+0.5
1,372,596	-				+0.4
1,372,596	-				-0.4
1,372,598	+				+0.4
1,372,598	+				-1.3
1,372,598	+				-2.1
1,372,598	+				+1.1
1,372,598	+				-0.1
1,372,598	+				+1.0
1,372,598	+				-0.6
1,372,601	-				-3.1
1,372,606	-				+0.7
1,372,606	-				+0.1
1,372,608	+				+0.1
1,372,615	+				-0.1
1,372,615	+				+0.0
1,372,615	+				-0.5
1,372,616	-				-0.7
1,372,616	-				-0.3
1,372,616	-				-0.2
1,372,625	+				+0.9
1,372,625	+				+0.3
1,372,625	+				+1.3
1,372,625	+				-0.1
1,372,625	+				-0.2
1,372,625	+				+0.3
1,372,625	+				-0.8
1,372,633	-				+0.8
1,372,633	-				+0.9
1,372,633	-				+1.9
1,372,633	-				-0.1
1,372,633	-				-1.3
1,372,633	-				-1.9
1,372,633	-				-0.2
1,372,633	-				+1.4
1,372,633	-				+0.3
1,372,635	+				+0.9
1,372,636	-				-0.4
1,372,637	+				-0.5
1,372,640	+				+1.5
1,372,640	+				+1.1
1,372,643	-				-1.8
1,372,645	-				-0.3
1,372,645	-				-0.4
1,372,652	+				+0.9
1,372,655	+				-1.8
1,372,663	-				-0.3
1,372,663	-				+0.0
1,372,663	-				-2.0
1,372,663	-				-0.6
1,372,663	-				+0.2
1,372,663	-				-0.8
1,372,668	-				-0.1
1,372,670	+				-0.4
1,372,670	-				-0.4
1,372,680	-				+0.1
1,372,692	+				-0.0
1,372,695	-				+0.1
1,372,696	+				+0.1
1,372,704	-				-0.2
1,372,706	+				-0.4
1,372,709	-				+1.0
1,372,709	-				-0.6
1,372,710	+				-1.1
1,372,714	-				+0.7
1,372,714	-				-1.9
1,372,718	-				-0.7
1,372,718	-				+0.3
1,372,720	+				+0.2
1,372,720	+				-0.3
1,372,726	+				-2.9
1,372,728	-				-0.2
1,372,728	-				+1.9
1,372,728	-				-1.1
1,372,734	-				-1.3
1,372,739	-				+0.4
1,372,741	+				-0.3
1,372,741	+				-1.0
1,372,744	+				+1.2
1,372,744	+				-0.5
1,372,745	-				+1.6
1,372,759	+				-2.0
1,372,767	-				+0.9
1,372,792	+				+0.0
1,372,792	+				+0.3
1,372,801	-				-0.1
1,372,809	-				+1.9
1,372,809	-				+0.4
1,372,809	-				-0.2
1,372,826	+				+0.2
1,372,832	+				+0.5
1,372,835	+				-0.1
1,372,835	+				+1.7
1,372,835	+				+0.1
1,372,835	+				-0.5
1,372,835	+				+1.8
1,372,835	+				-0.8
1,372,835	+				+0.0
1,372,835	+				+1.3
1,372,835	+				+0.4
1,372,837	+				-0.3
1,372,837	+				-0.7
1,372,837	+				+0.7
1,372,837	+				+0.1
1,372,837	+				+0.0
1,372,837	+				-0.3
1,372,837	+				-0.0
1,372,837	+				-0.4
1,372,837	+				+0.1
1,372,837	+				-0.9
1,372,837	+				-0.5
1,372,837	+				+0.0
1,372,837	+				-0.1
1,372,837	+				+0.9
1,372,837	+				-0.2
1,372,837	+				-0.0
1,372,837	+				-0.1
1,372,837	+				+0.6
1,372,837	+				-1.3
1,372,837	+				-0.4
1,372,837	+				+0.9
1,372,837	+				+1.2
1,372,837	+				+1.9
1,372,837	+				+0.8
1,372,837	+				+0.7
1,372,837	+				+1.8
1,372,837	+				+0.5
1,372,837	+				+0.6
1,372,837	+				+0.5
1,372,837	+				-0.7
1,372,837	+				-0.4
1,372,837	+				+0.5
1,372,837	+				+1.0
1,372,837	+				+0.3
1,372,837	+				-1.0
1,372,837	+				+0.3
1,372,837	+				+1.9
1,372,837	+				+1.6
1,372,840	-				+0.6
1,372,840	-				+1.2
1,372,843	-				+0.3
1,372,843	-				+0.1
1,372,843	-				+0.3
1,372,843	-				+0.3
1,372,843	-				-0.1
1,372,843	-				+0.9
1,372,845	-				-0.3
1,372,845	-				+0.7
1,372,845	-				+0.5
1,372,845	-				+2.5
1,372,845	-				-0.6
1,372,845	-				+0.3
1,372,845	-				+0.7
1,372,845	-				+0.1
1,372,845	-				-0.9
1,372,845	-				-0.9
1,372,845	-				-0.8
1,372,845	-				+0.1
1,372,845	-				-1.5
1,372,845	-				-0.5
1,372,845	-				+0.3
1,372,845	-				-1.7
1,372,845	-				-1.0
1,372,845	-				-0.6
1,372,845	-				-0.3
1,372,845	-				+0.5
1,372,845	-				-1.1
1,372,845	-				+0.5
1,372,847	+				-0.4
1,372,847	+				-1.1
1,372,847	+				+0.5
1,372,857	+				-2.5
1,372,860	-				+0.9
1,372,865	+				-0.1
1,372,875	-				-1.2
1,372,882	+				-0.1
1,372,882	+				-1.8
1,372,882	+				+0.0
1,372,884	+				-0.9
1,372,884	+				-0.5
1,372,884	+				-0.4
1,372,889	+				+0.3
1,372,890	-				+0.7
1,372,892	-				+0.3
1,372,892	-				+2.0
1,372,894	+				+0.9
1,372,894	+				-0.4
1,372,894	+				-1.9
1,372,902	-				+0.3
1,372,907	-				+2.1
1,372,912	-				+0.1
1,372,928	+				-1.1
1,372,938	+				+0.8
1,372,942	-				-0.0
1,372,942	-				+0.2
1,372,942	-				-0.7
1,372,949	+				+0.6
1,372,978	+				-1.1
1,372,978	+				-0.1
1,372,986	-				+0.3
1,372,986	-				+0.7
1,372,992	+				-1.2
1,372,992	+				+0.3
1,372,997	+				-0.1
1,373,000	-				+0.0
1,373,002	+				-0.3
1,373,002	+				+0.3
1,373,002	+				-0.5
1,373,004	+				+0.2
1,373,004	+				+0.1
1,373,010	-				+0.2
1,373,010	-				+0.4
1,373,012	-				-0.1
1,373,012	-				-0.8
1,373,025	+				+0.3
1,373,031	-				-0.5
1,373,032	+				-1.3
1,373,042	+				+0.9
1,373,045	-				-1.5
1,373,049	+				+0.1
1,373,049	+				-0.1
1,373,052	-				-1.6
1,373,052	-				-0.8
1,373,053	-				-0.2
1,373,053	-				-0.0
1,373,059	+				+0.6
1,373,059	+				+1.3
1,373,059	+				+0.3
1,373,059	+				+0.3
1,373,059	+				-0.9
1,373,059	+				-0.1
1,373,059	+				-0.3
1,373,062	+				-0.5
1,373,065	-				-0.5
1,373,067	-				-1.2
1,373,067	-				-0.0
1,373,067	-				-0.5
1,373,067	-				+0.9
1,373,095	-				+0.4
1,373,095	-				-0.5
1,373,095	-				+0.1
1,373,095	-				+0.3
1,373,095	-				-0.6
1,373,095	-				+0.9
1,373,095	-				-0.3
1,373,143	-				+0.5
1,373,148	+				+2.7
1,373,148	-				-0.8
1,373,151	-				+3.5
1,373,156	+				-1.0
1,373,156	-				+0.3
1,373,156	-				-1.5
1,373,156	-				+0.1
1,373,163	-				-0.2
1,373,164	-				-1.1
1,373,165	+				-0.9
1,373,165	-				+0.3
1,373,165	-				+0.2
1,373,165	-				+0.9
1,373,175	-				+0.0
1,373,185	+				+0.0
1,373,185	+				-0.3
1,373,185	+				-0.0
1,373,185	+				-0.0
1,373,193	-				-0.6
1,373,193	-				+0.1
1,373,193	-				-0.5
1,373,193	-				+0.0
1,373,193	-				+0.4
1,373,193	-				-0.8
1,373,193	-				-0.1
1,373,193	-				-1.3
1,373,198	+				-1.2
1,373,199	+				+1.1
1,373,199	+				-1.9
1,373,199	+				+1.2
1,373,199	+				-1.2
1,373,199	+				-0.1
1,373,207	-				+0.4
1,373,207	-				+0.6
1,373,207	-				-0.3
1,373,207	-				-0.0
1,373,207	-				-0.9
1,373,207	-				-0.4
1,373,208	+				+0.9
1,373,209	+				-1.9
1,373,209	+				+1.1
1,373,209	+				+0.4
1,373,210	+				-0.1
1,373,216	-				-0.4
1,373,216	-				-1.5
1,373,218	-				-0.7
1,373,221	+				-0.8
1,373,225	+				+0.3
1,373,225	+				-0.3
1,373,225	+				+0.1
1,373,225	+				-0.1
1,373,225	+				+0.1
1,373,225	+				+0.6
1,373,233	-				-1.1
1,373,233	-				-0.0
1,373,233	-				-0.4
1,373,233	-				-0.4
1,373,269	+				+0.9
1,373,273	+				+0.0
1,373,277	-				-0.4
1,373,282	-				+0.5
1,373,288	+				-0.2
1,373,302	+				+0.1
1,373,302	+				+0.5
1,373,310	-				-0.9
1,373,353	+				-0.4
1,373,363	+				+0.9
1,373,370	+				+1.3
1,373,378	-				-0.1
1,373,381	+				-0.4
1,373,381	+				-0.5
1,373,381	+				-0.3
1,373,381	+				-0.1
1,373,381	+				-1.3
1,373,381	+				+0.2
1,373,389	-				+0.2
1,373,389	-				+0.6
1,373,389	-				+0.1
1,373,389	-				+0.3
1,373,389	-				+0.1
1,373,389	-				-1.2
1,373,389	-				-2.2
1,373,389	-				+0.2
1,373,389	-				-1.5
1,373,389	-				+0.3
1,373,389	-				-0.9
1,373,389	-				-0.6
1,373,393	+				+0.2
1,373,429	+		HSERO_RS06090	0.14	-0.0
1,373,431	+		HSERO_RS06090	0.14	+0.9
1,373,431	+		HSERO_RS06090	0.14	-1.5
1,373,440	+		HSERO_RS06090	0.15	+1.0
1,373,482	+		HSERO_RS06090	0.20	-0.9
1,373,494	+		HSERO_RS06090	0.21	-0.5
1,373,514	-		HSERO_RS06090	0.23	+2.5
1,373,514	-		HSERO_RS06090	0.23	-1.3
1,373,515	-		HSERO_RS06090	0.23	+0.9
1,373,515	-		HSERO_RS06090	0.23	-0.9
1,373,520	-		HSERO_RS06090	0.24	+0.1
1,373,527	-		HSERO_RS06090	0.24	-1.0
1,373,615	-		HSERO_RS06090	0.34	+2.1
1,373,677	+		HSERO_RS06090	0.41	-0.3
1,373,685	-		HSERO_RS06090	0.42	-2.6
1,373,685	-		HSERO_RS06090	0.42	-1.2
1,373,685	-		HSERO_RS06090	0.42	-0.5
1,373,738	+		HSERO_RS06090	0.47	-0.1
1,373,738	+		HSERO_RS06090	0.47	-0.0
1,373,741	-		HSERO_RS06090	0.48	-0.3
1,373,789	-		HSERO_RS06090	0.53	-0.3
1,373,789	-		HSERO_RS06090	0.53	+0.3
1,373,789	-		HSERO_RS06090	0.53	-0.3
1,373,825	+		HSERO_RS06090	0.57	+1.7
1,373,833	-		HSERO_RS06090	0.58	-0.0
1,373,901	+		HSERO_RS06090	0.65	-1.8
1,373,945	+		HSERO_RS06090	0.70	-0.2
1,373,958	+		HSERO_RS06090	0.71	+0.3
1,373,977	+		HSERO_RS06090	0.73	-0.3
1,373,980	+		HSERO_RS06090	0.74	+0.4
1,373,983	-		HSERO_RS06090	0.74	+0.8
1,373,985	-		HSERO_RS06090	0.74	+0.6
1,373,985	-		HSERO_RS06090	0.74	-0.4
1,374,007	+		HSERO_RS06090	0.77	+0.5
1,374,040	-		HSERO_RS06090	0.80	-0.8
1,374,069	-		HSERO_RS06090	0.83	-0.9
1,374,071	+		HSERO_RS06090	0.83	-1.0
1,374,109	-		HSERO_RS06090	0.88	+0.1
1,374,143	+				+0.9
1,374,151	-				-0.6
1,374,157	-				-0.7
1,374,159	+				-0.6
1,374,159	+				-0.3
1,374,159	+				-0.1
1,374,167	-				-0.8
1,374,167	-				+0.1
1,374,181	+				+0.5
1,374,187	+				+0.3
1,374,190	-				-0.7
1,374,196	-				+0.0
1,374,198	-				+0.3
1,374,198	-				+1.5
1,374,259	+				-0.1
1,374,264	+				+0.0
1,374,274	-				+0.9
1,374,286	-				+0.6
1,374,286	-				-2.3
1,374,357	+				+0.4
1,374,362	+				-0.5
1,374,367	+				+0.0
1,374,392	+				+0.4
1,374,425	+				-0.1
1,374,547	-				+0.2
1,374,844	+		HSERO_RS06100	0.12	+1.0
1,375,115	-				-0.1