Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_03303 and CCNA_03304 are separated by 119 nucleotides CCNA_03304 and CCNA_03305 are separated by 114 nucleotides CCNA_03305 and CCNA_03306 are separated by 13 nucleotides CCNA_03306 and CCNA_03307 are separated by 23 nucleotides
CCNA_03303: CCNA_03303 - translation elongation factor Tu (EF-TU), at 3,479,680 to 3,480,870
_03303
CCNA_03304: CCNA_03304 - translation elongation factor G (EF-G), at 3,480,990 to 3,483,068
_03304
CCNA_03305: CCNA_03305 - SSU ribosomal protein S7P, at 3,483,183 to 3,483,656
_03305
CCNA_03306: CCNA_03306 - SSU ribosomal protein S12P, at 3,483,670 to 3,484,041
_03306
CCNA_03307: CCNA_03307 - hypothetical protein, at 3,484,065 to 3,484,331
_03307
Position (kb)
3480
3481
3482
3483
3484 Strain fitness (log2 ratio)
-1
0
1 at 3480.887 kb on + strand at 3480.914 kb on + strand at 3480.914 kb on - strand at 3480.922 kb on - strand at 3480.933 kb on - strand at 3480.933 kb on - strand at 3480.934 kb on + strand at 3480.942 kb on - strand at 3480.956 kb on + strand at 3483.182 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,480,887 + -0.7 3,480,914 + +0.4 3,480,914 - +1.4 3,480,922 - +0.7 3,480,933 - +0.9 3,480,933 - +1.0 3,480,934 + +0.9 3,480,942 - +1.1 3,480,956 + +0.6 3,483,182 - +0.1
Or see this region's nucleotide sequence