Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03304

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_03303 and CCNA_03304 are separated by 119 nucleotidesCCNA_03304 and CCNA_03305 are separated by 114 nucleotidesCCNA_03305 and CCNA_03306 are separated by 13 nucleotidesCCNA_03306 and CCNA_03307 are separated by 23 nucleotides CCNA_03303: CCNA_03303 - translation elongation factor Tu (EF-TU), at 3,479,680 to 3,480,870 _03303 CCNA_03304: CCNA_03304 - translation elongation factor G (EF-G), at 3,480,990 to 3,483,068 _03304 CCNA_03305: CCNA_03305 - SSU ribosomal protein S7P, at 3,483,183 to 3,483,656 _03305 CCNA_03306: CCNA_03306 - SSU ribosomal protein S12P, at 3,483,670 to 3,484,041 _03306 CCNA_03307: CCNA_03307 - hypothetical protein, at 3,484,065 to 3,484,331 _03307 Position (kb) 3480 3481 3482 3483 3484Strain fitness (log2 ratio) -1 0 1at 3480.887 kb on + strandat 3480.914 kb on + strandat 3480.914 kb on - strandat 3480.922 kb on - strandat 3480.933 kb on - strandat 3480.933 kb on - strandat 3480.934 kb on + strandat 3480.942 kb on - strandat 3480.956 kb on + strandat 3483.182 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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3,480,887 + -0.7
3,480,914 + +0.4
3,480,914 - +1.4
3,480,922 - +0.7
3,480,933 - +0.9
3,480,933 - +1.0
3,480,934 + +0.9
3,480,942 - +1.1
3,480,956 + +0.6
3,483,182 - +0.1

Or see this region's nucleotide sequence