Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_00061 and CCNA_00062 are separated by 173 nucleotides CCNA_00062 and CCNA_03913 are separated by 78 nucleotides CCNA_03913 and CCNA_00063 are separated by 41 nucleotides
CCNA_00061: CCNA_00061 - cytochrome p450, at 61,885 to 63,153
_00061
CCNA_00062: CCNA_00062 - tryptophanyl-tRNA synthetase, at 63,327 to 64,361
_00062
CCNA_03913: CCNA_03913 - hypothetical protein, at 64,440 to 64,487
_03913
CCNA_00063: CCNA_00063 - MviN-family integral membrane protein, at 64,529 to 66,091
_00063
Position (kb)
63
64
65 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 62.363 kb on - strand, within CCNA_00061 at 62.375 kb on + strand, within CCNA_00061 at 62.411 kb on - strand, within CCNA_00061 at 62.425 kb on + strand, within CCNA_00061 at 62.435 kb on + strand, within CCNA_00061 at 62.435 kb on + strand, within CCNA_00061 at 62.443 kb on - strand, within CCNA_00061 at 62.443 kb on - strand, within CCNA_00061 at 62.443 kb on - strand, within CCNA_00061 at 62.443 kb on - strand, within CCNA_00061 at 62.458 kb on + strand, within CCNA_00061 at 62.476 kb on - strand, within CCNA_00061 at 62.505 kb on + strand, within CCNA_00061 at 62.563 kb on - strand, within CCNA_00061 at 62.589 kb on + strand, within CCNA_00061 at 62.630 kb on - strand, within CCNA_00061 at 62.683 kb on - strand, within CCNA_00061 at 62.699 kb on + strand, within CCNA_00061 at 62.706 kb on - strand, within CCNA_00061 at 62.707 kb on - strand, within CCNA_00061 at 62.707 kb on - strand, within CCNA_00061 at 62.709 kb on + strand, within CCNA_00061 at 62.717 kb on - strand, within CCNA_00061 at 62.717 kb on - strand, within CCNA_00061 at 62.717 kb on - strand, within CCNA_00061 at 62.729 kb on + strand, within CCNA_00061 at 62.736 kb on + strand, within CCNA_00061 at 62.737 kb on - strand, within CCNA_00061 at 62.742 kb on + strand, within CCNA_00061 at 62.747 kb on + strand, within CCNA_00061 at 62.795 kb on + strand, within CCNA_00061 at 62.805 kb on - strand, within CCNA_00061 at 62.870 kb on + strand, within CCNA_00061 at 62.892 kb on + strand, within CCNA_00061 at 62.931 kb on + strand, within CCNA_00061 at 62.939 kb on - strand, within CCNA_00061 at 62.939 kb on - strand, within CCNA_00061 at 62.946 kb on + strand, within CCNA_00061 at 62.946 kb on + strand, within CCNA_00061 at 62.993 kb on + strand, within CCNA_00061 at 63.021 kb on + strand, within CCNA_00061 at 63.022 kb on - strand, within CCNA_00061 at 63.029 kb on - strand at 63.029 kb on - strand at 63.070 kb on - strand at 63.081 kb on + strand at 63.081 kb on + strand at 63.081 kb on + strand at 63.090 kb on + strand at 63.147 kb on + strand at 63.147 kb on + strand at 63.147 kb on + strand at 63.147 kb on + strand at 63.155 kb on - strand at 63.155 kb on - strand at 63.157 kb on + strand at 63.189 kb on - strand at 63.198 kb on + strand at 63.198 kb on + strand at 63.198 kb on + strand at 63.198 kb on + strand at 63.206 kb on - strand at 63.239 kb on - strand at 63.276 kb on - strand at 63.299 kb on - strand at 63.327 kb on - strand at 64.363 kb on + strand at 64.384 kb on + strand at 64.450 kb on - strand, within CCNA_03913 at 64.500 kb on + strand at 64.502 kb on + strand at 64.502 kb on + strand at 64.502 kb on + strand at 64.510 kb on - strand at 64.510 kb on - strand at 64.510 kb on - strand at 64.510 kb on - strand at 64.512 kb on + strand at 64.520 kb on - strand at 64.520 kb on - strand at 64.520 kb on - strand at 64.525 kb on - strand at 64.525 kb on - strand at 64.530 kb on - strand at 64.557 kb on + strand at 64.560 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.581 kb on - strand at 64.581 kb on - strand at 64.581 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.649 kb on + strand at 64.649 kb on + strand at 64.657 kb on - strand at 64.670 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 62,363 - CCNA_00061 0.38 -0.9 62,375 + CCNA_00061 0.39 -0.7 62,411 - CCNA_00061 0.41 -1.2 62,425 + CCNA_00061 0.43 +0.6 62,435 + CCNA_00061 0.43 -0.3 62,435 + CCNA_00061 0.43 -1.9 62,443 - CCNA_00061 0.44 +0.7 62,443 - CCNA_00061 0.44 -1.5 62,443 - CCNA_00061 0.44 -1.1 62,443 - CCNA_00061 0.44 -0.2 62,458 + CCNA_00061 0.45 -2.8 62,476 - CCNA_00061 0.47 -0.1 62,505 + CCNA_00061 0.49 -0.1 62,563 - CCNA_00061 0.53 -0.1 62,589 + CCNA_00061 0.55 +0.9 62,630 - CCNA_00061 0.59 +0.3 62,683 - CCNA_00061 0.63 -1.0 62,699 + CCNA_00061 0.64 +2.3 62,706 - CCNA_00061 0.65 -0.7 62,707 - CCNA_00061 0.65 +0.7 62,707 - CCNA_00061 0.65 -0.2 62,709 + CCNA_00061 0.65 -0.3 62,717 - CCNA_00061 0.66 -0.0 62,717 - CCNA_00061 0.66 -1.2 62,717 - CCNA_00061 0.66 -0.3 62,729 + CCNA_00061 0.67 -1.8 62,736 + CCNA_00061 0.67 +0.3 62,737 - CCNA_00061 0.67 -0.9 62,742 + CCNA_00061 0.68 -1.7 62,747 + CCNA_00061 0.68 +0.2 62,795 + CCNA_00061 0.72 -0.3 62,805 - CCNA_00061 0.72 -1.0 62,870 + CCNA_00061 0.78 +0.0 62,892 + CCNA_00061 0.79 -1.7 62,931 + CCNA_00061 0.82 -0.3 62,939 - CCNA_00061 0.83 -0.1 62,939 - CCNA_00061 0.83 +0.3 62,946 + CCNA_00061 0.84 +0.5 62,946 + CCNA_00061 0.84 +0.1 62,993 + CCNA_00061 0.87 -1.5 63,021 + CCNA_00061 0.90 +0.3 63,022 - CCNA_00061 0.90 -0.3 63,029 - +0.5 63,029 - -0.3 63,070 - -0.2 63,081 + +0.2 63,081 + +1.3 63,081 + +0.9 63,090 + +0.8 63,147 + +0.2 63,147 + +1.1 63,147 + -0.1 63,147 + +0.5 63,155 - -0.5 63,155 - -1.1 63,157 + +0.7 63,189 - +0.8 63,198 + +0.7 63,198 + -0.9 63,198 + +1.2 63,198 + -0.0 63,206 - +0.2 63,239 - +1.2 63,276 - +0.5 63,299 - +1.2 63,327 - +1.2 64,363 + +1.9 64,384 + +0.8 64,450 - CCNA_03913 0.21 +0.1 64,500 + +1.5 64,502 + +0.7 64,502 + -0.1 64,502 + +0.1 64,510 - +1.9 64,510 - +1.3 64,510 - +0.1 64,510 - +0.6 64,512 + -1.0 64,520 - +0.5 64,520 - +0.5 64,520 - -1.1 64,525 - -0.3 64,525 - +0.3 64,530 - +0.5 64,557 + -1.0 64,560 - +1.2 64,565 - +1.1 64,565 - +1.2 64,565 - +0.1 64,565 - +1.1 64,565 - +0.7 64,565 - -0.0 64,565 - +1.1 64,581 - +1.4 64,581 - +0.8 64,581 - +0.7 64,613 - +0.5 64,613 - +1.3 64,613 - +0.5 64,613 - +1.9 64,613 - +0.7 64,613 - +0.2 64,613 - +0.5 64,613 - +0.5 64,613 - +0.5 64,613 - -0.0 64,613 - +1.3 64,613 - +0.2 64,613 - +0.6 64,649 + -1.0 64,649 + -3.0 64,657 - -2.0 64,670 - -0.4
Or see this region's nucleotide sequence