Experiment: R2A with Nickel (II) chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS19010 and CA265_RS19015 are separated by 18 nucleotides CA265_RS19015 and CA265_RS19020 are separated by 34 nucleotides CA265_RS19020 and CA265_RS19025 are separated by 47 nucleotides
CA265_RS19010: CA265_RS19010 - aspartyl/glutamyl-tRNA amidotransferase subunit A, at 4,731,083 to 4,732,501
_RS19010
CA265_RS19015: CA265_RS19015 - twin-arginine translocase TatA/TatE family subunit, at 4,732,520 to 4,732,696
_RS19015
CA265_RS19020: CA265_RS19020 - twin-arginine translocase TatA/TatE family subunit, at 4,732,731 to 4,733,090
_RS19020
CA265_RS19025: CA265_RS19025 - peptidase M23, at 4,733,138 to 4,734,433
_RS19025
Position (kb)
4732
4733
4734 Strain fitness (log2 ratio)
-2
-1
0
1 at 4733.201 kb on + strand at 4733.264 kb on + strand at 4733.265 kb on - strand at 4733.296 kb on - strand, within CA265_RS19025 at 4733.296 kb on - strand, within CA265_RS19025 at 4733.349 kb on - strand, within CA265_RS19025 at 4733.369 kb on - strand, within CA265_RS19025 at 4733.411 kb on - strand, within CA265_RS19025 at 4733.411 kb on - strand, within CA265_RS19025 at 4733.453 kb on - strand, within CA265_RS19025 at 4733.501 kb on + strand, within CA265_RS19025 at 4733.502 kb on - strand, within CA265_RS19025 at 4733.561 kb on - strand, within CA265_RS19025 at 4733.600 kb on - strand, within CA265_RS19025 at 4733.612 kb on - strand, within CA265_RS19025 at 4733.612 kb on - strand, within CA265_RS19025 at 4733.616 kb on - strand, within CA265_RS19025 at 4733.779 kb on + strand, within CA265_RS19025 at 4733.846 kb on - strand, within CA265_RS19025 at 4733.851 kb on + strand, within CA265_RS19025 at 4733.906 kb on - strand, within CA265_RS19025 at 4733.914 kb on + strand, within CA265_RS19025 at 4733.953 kb on + strand, within CA265_RS19025 at 4733.964 kb on + strand, within CA265_RS19025 at 4733.992 kb on + strand, within CA265_RS19025 at 4734.003 kb on - strand, within CA265_RS19025
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Nickel (II) chloride 0.3 mM remove 4,733,201 + +0.3 4,733,264 + +1.0 4,733,265 - -2.1 4,733,296 - CA265_RS19025 0.12 -0.6 4,733,296 - CA265_RS19025 0.12 -2.2 4,733,349 - CA265_RS19025 0.16 -1.1 4,733,369 - CA265_RS19025 0.18 +0.2 4,733,411 - CA265_RS19025 0.21 -2.1 4,733,411 - CA265_RS19025 0.21 +0.4 4,733,453 - CA265_RS19025 0.24 -1.7 4,733,501 + CA265_RS19025 0.28 +0.1 4,733,502 - CA265_RS19025 0.28 -1.1 4,733,561 - CA265_RS19025 0.33 -2.4 4,733,600 - CA265_RS19025 0.36 -0.3 4,733,612 - CA265_RS19025 0.37 -0.4 4,733,612 - CA265_RS19025 0.37 -0.3 4,733,616 - CA265_RS19025 0.37 -1.4 4,733,779 + CA265_RS19025 0.49 -0.1 4,733,846 - CA265_RS19025 0.55 +1.5 4,733,851 + CA265_RS19025 0.55 -1.0 4,733,906 - CA265_RS19025 0.59 -1.0 4,733,914 + CA265_RS19025 0.60 -1.0 4,733,953 + CA265_RS19025 0.63 -0.2 4,733,964 + CA265_RS19025 0.64 -2.4 4,733,992 + CA265_RS19025 0.66 -0.7 4,734,003 - CA265_RS19025 0.67 -2.4
Or see this region's nucleotide sequence