Experiment: R2A with Nickel (II) chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03210 and CA265_RS03215 are separated by 106 nucleotides CA265_RS03215 and CA265_RS03220 are separated by 92 nucleotides CA265_RS03220 and CA265_RS03225 are separated by 944 nucleotides
CA265_RS03210: CA265_RS03210 - hypothetical protein, at 789,543 to 790,385
_RS03210
CA265_RS03215: CA265_RS03215 - mutarotase, at 790,492 to 791,175
_RS03215
CA265_RS03220: CA265_RS03220 - glycine--tRNA ligase, at 791,268 to 792,911
_RS03220
CA265_RS03225: CA265_RS03225 - hypothetical protein, at 793,856 to 794,059
_RS03225
Position (kb) 791
792
793 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 790.362 kb on + strand at 790.381 kb on + strand at 790.405 kb on - strand at 790.405 kb on - strand at 790.490 kb on + strand at 790.511 kb on - strand at 790.545 kb on - strand at 790.554 kb on + strand at 790.557 kb on - strand at 790.633 kb on - strand, within CA265_RS03215 at 790.637 kb on - strand, within CA265_RS03215 at 790.672 kb on - strand, within CA265_RS03215 at 790.692 kb on + strand, within CA265_RS03215 at 790.870 kb on - strand, within CA265_RS03215 at 790.878 kb on + strand, within CA265_RS03215 at 790.881 kb on - strand, within CA265_RS03215 at 790.881 kb on - strand, within CA265_RS03215 at 790.896 kb on + strand, within CA265_RS03215 at 790.904 kb on - strand, within CA265_RS03215 at 790.932 kb on + strand, within CA265_RS03215 at 790.933 kb on - strand, within CA265_RS03215 at 790.940 kb on - strand, within CA265_RS03215 at 790.973 kb on + strand, within CA265_RS03215 at 790.974 kb on - strand, within CA265_RS03215 at 791.145 kb on - strand at 792.929 kb on - strand at 792.951 kb on + strand at 792.958 kb on + strand at 793.044 kb on + strand at 793.182 kb on - strand at 793.182 kb on - strand at 793.284 kb on + strand at 793.284 kb on + strand at 793.285 kb on - strand at 793.286 kb on + strand at 793.286 kb on + strand at 793.287 kb on - strand at 793.316 kb on + strand at 793.317 kb on - strand at 793.317 kb on - strand at 793.341 kb on - strand at 793.379 kb on - strand at 793.453 kb on + strand at 793.453 kb on + strand at 793.473 kb on + strand at 793.498 kb on - strand at 793.498 kb on - strand at 793.541 kb on - strand at 793.550 kb on + strand at 793.683 kb on + strand at 793.683 kb on + strand at 793.734 kb on + strand at 793.735 kb on - strand at 793.736 kb on + strand at 793.737 kb on - strand at 793.737 kb on - strand at 793.745 kb on + strand at 793.748 kb on + strand at 793.776 kb on - strand at 793.807 kb on - strand at 793.889 kb on + strand, within CA265_RS03225 at 793.889 kb on + strand, within CA265_RS03225
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Nickel (II) chloride 0.3 mM remove 790,362 + +0.2 790,381 + +0.3 790,405 - +0.4 790,405 - -0.7 790,490 + +0.2 790,511 - -0.3 790,545 - -0.3 790,554 + +0.7 790,557 - +0.2 790,633 - CA265_RS03215 0.21 +0.2 790,637 - CA265_RS03215 0.21 -0.0 790,672 - CA265_RS03215 0.26 -2.8 790,692 + CA265_RS03215 0.29 -0.8 790,870 - CA265_RS03215 0.55 -0.1 790,878 + CA265_RS03215 0.56 -0.4 790,881 - CA265_RS03215 0.57 +0.4 790,881 - CA265_RS03215 0.57 -0.7 790,896 + CA265_RS03215 0.59 -1.0 790,904 - CA265_RS03215 0.60 -0.3 790,932 + CA265_RS03215 0.64 -0.1 790,933 - CA265_RS03215 0.64 +0.9 790,940 - CA265_RS03215 0.65 +0.0 790,973 + CA265_RS03215 0.70 +0.1 790,974 - CA265_RS03215 0.70 +1.3 791,145 - -0.4 792,929 - +0.5 792,951 + -0.2 792,958 + +0.2 793,044 + -1.4 793,182 - -0.9 793,182 - -0.3 793,284 + -0.2 793,284 + -0.1 793,285 - +0.6 793,286 + +0.5 793,286 + -0.8 793,287 - -0.6 793,316 + +0.1 793,317 - +0.5 793,317 - -0.2 793,341 - +0.3 793,379 - -0.4 793,453 + -0.2 793,453 + +1.6 793,473 + +1.0 793,498 - -0.2 793,498 - -0.5 793,541 - -0.0 793,550 + +0.7 793,683 + -0.3 793,683 + +0.4 793,734 + +1.1 793,735 - -0.7 793,736 + -0.1 793,737 - +0.8 793,737 - -0.1 793,745 + +0.5 793,748 + +0.1 793,776 - +0.1 793,807 - -0.1 793,889 + CA265_RS03225 0.16 +0.2 793,889 + CA265_RS03225 0.16 +1.9
Or see this region's nucleotide sequence