Experiment: R2A with Nickel (II) chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01110 and CA265_RS01115 are separated by 292 nucleotides CA265_RS01115 and CA265_RS01120 are separated by 64 nucleotides CA265_RS01120 and CA265_RS01125 are separated by 197 nucleotides
CA265_RS01110: CA265_RS01110 - hypothetical protein, at 280,999 to 283,446
_RS01110
CA265_RS01115: CA265_RS01115 - hypothetical protein, at 283,739 to 284,737
_RS01115
CA265_RS01120: CA265_RS01120 - hypothetical protein, at 284,802 to 284,981
_RS01120
CA265_RS01125: CA265_RS01125 - gluconate permease, at 285,179 to 286,468
_RS01125
Position (kb) 283
284
285 Strain fitness (log2 ratio) -2
-1
0
1
2 at 282.759 kb on + strand, within CA265_RS01110 at 282.766 kb on + strand, within CA265_RS01110 at 282.774 kb on + strand, within CA265_RS01110 at 282.775 kb on - strand, within CA265_RS01110 at 282.823 kb on - strand, within CA265_RS01110 at 282.841 kb on - strand, within CA265_RS01110 at 282.910 kb on + strand, within CA265_RS01110 at 282.911 kb on - strand, within CA265_RS01110 at 282.911 kb on - strand, within CA265_RS01110 at 282.913 kb on + strand, within CA265_RS01110 at 283.006 kb on + strand, within CA265_RS01110 at 283.006 kb on + strand, within CA265_RS01110 at 283.007 kb on - strand, within CA265_RS01110 at 283.046 kb on - strand, within CA265_RS01110 at 283.046 kb on - strand, within CA265_RS01110 at 283.076 kb on - strand, within CA265_RS01110 at 283.257 kb on + strand at 283.287 kb on - strand at 283.287 kb on - strand at 283.359 kb on + strand at 283.360 kb on - strand at 283.360 kb on - strand at 283.545 kb on - strand at 283.550 kb on + strand at 283.660 kb on - strand at 283.662 kb on + strand at 283.689 kb on - strand at 283.696 kb on - strand at 285.014 kb on - strand at 285.051 kb on + strand at 285.052 kb on - strand at 285.121 kb on + strand at 285.130 kb on + strand at 285.130 kb on + strand at 285.131 kb on - strand at 285.218 kb on + strand at 285.285 kb on + strand at 285.317 kb on + strand, within CA265_RS01125 at 285.318 kb on - strand, within CA265_RS01125 at 285.539 kb on - strand, within CA265_RS01125 at 285.656 kb on + strand, within CA265_RS01125 at 285.657 kb on - strand, within CA265_RS01125 at 285.713 kb on - strand, within CA265_RS01125 at 285.724 kb on + strand, within CA265_RS01125
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Nickel (II) chloride 0.3 mM remove 282,759 + CA265_RS01110 0.72 +0.8 282,766 + CA265_RS01110 0.72 -0.2 282,774 + CA265_RS01110 0.73 -0.8 282,775 - CA265_RS01110 0.73 +0.3 282,823 - CA265_RS01110 0.75 +0.8 282,841 - CA265_RS01110 0.75 -0.3 282,910 + CA265_RS01110 0.78 +0.6 282,911 - CA265_RS01110 0.78 +0.1 282,911 - CA265_RS01110 0.78 +0.5 282,913 + CA265_RS01110 0.78 +0.2 283,006 + CA265_RS01110 0.82 +0.9 283,006 + CA265_RS01110 0.82 -0.8 283,007 - CA265_RS01110 0.82 +1.2 283,046 - CA265_RS01110 0.84 +1.3 283,046 - CA265_RS01110 0.84 -0.4 283,076 - CA265_RS01110 0.85 +0.2 283,257 + -0.2 283,287 - +0.5 283,287 - -0.1 283,359 + +0.2 283,360 - -0.3 283,360 - +0.7 283,545 - -2.2 283,550 + -0.3 283,660 - -0.2 283,662 + -0.2 283,689 - -0.2 283,696 - -0.0 285,014 - +0.2 285,051 + -0.7 285,052 - +0.3 285,121 + +0.7 285,130 + -0.7 285,130 + -0.2 285,131 - -0.2 285,218 + +0.8 285,285 + +0.1 285,317 + CA265_RS01125 0.11 +0.1 285,318 - CA265_RS01125 0.11 -1.0 285,539 - CA265_RS01125 0.28 -0.1 285,656 + CA265_RS01125 0.37 -0.2 285,657 - CA265_RS01125 0.37 -0.3 285,713 - CA265_RS01125 0.41 -0.5 285,724 + CA265_RS01125 0.42 +1.8
Or see this region's nucleotide sequence