Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27320 and AO356_27325 are separated by 17 nucleotides AO356_27325 and AO356_27330 overlap by 4 nucleotides
AO356_27320: AO356_27320 - MFS transporter permease, at 6,226,386 to 6,227,687
_27320
AO356_27325: AO356_27325 - transketolase, at 6,227,705 to 6,228,553
_27325
AO356_27330: AO356_27330 - transketolase, at 6,228,550 to 6,229,572
_27330
Position (kb)
6227
6228
6229 Strain fitness (log2 ratio)
-1
0
1 at 6226.731 kb on + strand, within AO356_27320 at 6226.733 kb on + strand, within AO356_27320 at 6226.734 kb on - strand, within AO356_27320 at 6226.792 kb on - strand, within AO356_27320 at 6226.796 kb on + strand, within AO356_27320 at 6226.796 kb on + strand, within AO356_27320 at 6226.797 kb on - strand, within AO356_27320 at 6226.797 kb on - strand, within AO356_27320 at 6226.800 kb on + strand, within AO356_27320 at 6226.800 kb on + strand, within AO356_27320 at 6226.816 kb on - strand, within AO356_27320 at 6227.208 kb on - strand, within AO356_27320 at 6227.265 kb on + strand, within AO356_27320 at 6227.719 kb on - strand at 6227.808 kb on - strand, within AO356_27325 at 6227.808 kb on - strand, within AO356_27325 at 6227.852 kb on + strand, within AO356_27325 at 6227.871 kb on - strand, within AO356_27325 at 6227.945 kb on + strand, within AO356_27325 at 6227.946 kb on - strand, within AO356_27325 at 6227.997 kb on - strand, within AO356_27325 at 6227.997 kb on - strand, within AO356_27325 at 6228.042 kb on - strand, within AO356_27325 at 6228.042 kb on - strand, within AO356_27325 at 6228.184 kb on + strand, within AO356_27325 at 6228.185 kb on - strand, within AO356_27325 at 6228.185 kb on - strand, within AO356_27325 at 6228.495 kb on + strand at 6228.496 kb on - strand at 6228.568 kb on - strand at 6228.739 kb on + strand, within AO356_27330 at 6228.754 kb on - strand, within AO356_27330 at 6228.785 kb on - strand, within AO356_27330 at 6228.869 kb on - strand, within AO356_27330 at 6229.111 kb on + strand, within AO356_27330 at 6229.111 kb on + strand, within AO356_27330 at 6229.111 kb on + strand, within AO356_27330 at 6229.112 kb on - strand, within AO356_27330 at 6229.136 kb on + strand, within AO356_27330 at 6229.156 kb on + strand, within AO356_27330 at 6229.156 kb on + strand, within AO356_27330 at 6229.156 kb on + strand, within AO356_27330 at 6229.215 kb on - strand, within AO356_27330 at 6229.467 kb on - strand, within AO356_27330
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 6,226,731 + AO356_27320 0.26 -0.4 6,226,733 + AO356_27320 0.27 +0.1 6,226,734 - AO356_27320 0.27 -0.2 6,226,792 - AO356_27320 0.31 -0.9 6,226,796 + AO356_27320 0.31 -0.2 6,226,796 + AO356_27320 0.31 -0.0 6,226,797 - AO356_27320 0.32 -0.6 6,226,797 - AO356_27320 0.32 -0.9 6,226,800 + AO356_27320 0.32 +0.3 6,226,800 + AO356_27320 0.32 -0.0 6,226,816 - AO356_27320 0.33 -0.4 6,227,208 - AO356_27320 0.63 -0.2 6,227,265 + AO356_27320 0.68 +0.8 6,227,719 - +0.0 6,227,808 - AO356_27325 0.12 -0.4 6,227,808 - AO356_27325 0.12 -0.9 6,227,852 + AO356_27325 0.17 -0.2 6,227,871 - AO356_27325 0.20 +0.4 6,227,945 + AO356_27325 0.28 +1.1 6,227,946 - AO356_27325 0.28 +0.4 6,227,997 - AO356_27325 0.34 -0.9 6,227,997 - AO356_27325 0.34 -0.6 6,228,042 - AO356_27325 0.40 +0.8 6,228,042 - AO356_27325 0.40 +1.1 6,228,184 + AO356_27325 0.56 +0.0 6,228,185 - AO356_27325 0.57 -1.0 6,228,185 - AO356_27325 0.57 -1.1 6,228,495 + -0.3 6,228,496 - +0.6 6,228,568 - +0.1 6,228,739 + AO356_27330 0.18 -0.1 6,228,754 - AO356_27330 0.20 -0.8 6,228,785 - AO356_27330 0.23 -0.4 6,228,869 - AO356_27330 0.31 +0.3 6,229,111 + AO356_27330 0.55 -0.9 6,229,111 + AO356_27330 0.55 -0.1 6,229,111 + AO356_27330 0.55 +0.1 6,229,112 - AO356_27330 0.55 +0.6 6,229,136 + AO356_27330 0.57 +1.1 6,229,156 + AO356_27330 0.59 +0.2 6,229,156 + AO356_27330 0.59 +0.6 6,229,156 + AO356_27330 0.59 +0.3 6,229,215 - AO356_27330 0.65 +0.4 6,229,467 - AO356_27330 0.90 +0.7
Or see this region's nucleotide sequence