Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17750 and AO356_17755 are separated by 157 nucleotides AO356_17755 and AO356_17760 are separated by 141 nucleotides
AO356_17750: AO356_17750 - LysR family transcriptional regulator, at 4,005,672 to 4,006,553
_17750
AO356_17755: AO356_17755 - hypothetical protein, at 4,006,711 to 4,008,342
_17755
AO356_17760: AO356_17760 - AraC family transcriptional regulator, at 4,008,484 to 4,009,413
_17760
Position (kb)
4006
4007
4008
4009 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4005.750 kb on + strand at 4005.750 kb on + strand at 4005.750 kb on + strand at 4005.751 kb on - strand at 4006.123 kb on + strand, within AO356_17750 at 4006.124 kb on - strand, within AO356_17750 at 4006.124 kb on - strand, within AO356_17750 at 4006.124 kb on - strand, within AO356_17750 at 4006.275 kb on + strand, within AO356_17750 at 4006.275 kb on + strand, within AO356_17750 at 4006.276 kb on - strand, within AO356_17750 at 4006.276 kb on - strand, within AO356_17750 at 4006.409 kb on - strand, within AO356_17750 at 4006.585 kb on + strand at 4006.585 kb on + strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.588 kb on + strand at 4006.633 kb on + strand at 4006.634 kb on - strand at 4006.685 kb on + strand at 4006.730 kb on + strand at 4006.730 kb on + strand at 4006.730 kb on + strand at 4006.731 kb on - strand at 4006.731 kb on - strand at 4006.731 kb on - strand at 4006.742 kb on + strand at 4006.742 kb on + strand at 4006.743 kb on - strand at 4006.805 kb on - strand at 4006.828 kb on - strand at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.911 kb on - strand, within AO356_17755 at 4006.911 kb on - strand, within AO356_17755 at 4006.911 kb on - strand, within AO356_17755 at 4007.283 kb on - strand, within AO356_17755 at 4007.545 kb on + strand, within AO356_17755 at 4007.545 kb on + strand, within AO356_17755 at 4007.553 kb on + strand, within AO356_17755 at 4007.554 kb on - strand, within AO356_17755 at 4007.554 kb on - strand, within AO356_17755 at 4007.554 kb on - strand, within AO356_17755 at 4007.629 kb on + strand, within AO356_17755 at 4007.630 kb on - strand, within AO356_17755 at 4007.872 kb on + strand, within AO356_17755 at 4007.872 kb on + strand, within AO356_17755 at 4007.872 kb on + strand, within AO356_17755 at 4007.872 kb on + strand, within AO356_17755 at 4007.873 kb on - strand, within AO356_17755 at 4007.873 kb on - strand, within AO356_17755 at 4008.115 kb on - strand, within AO356_17755 at 4008.125 kb on - strand, within AO356_17755 at 4008.142 kb on + strand, within AO356_17755 at 4008.142 kb on + strand, within AO356_17755 at 4008.142 kb on + strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.143 kb on - strand, within AO356_17755 at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.184 kb on + strand at 4008.185 kb on - strand at 4008.185 kb on - strand at 4008.185 kb on - strand at 4008.402 kb on - strand at 4008.402 kb on - strand at 4008.402 kb on - strand at 4008.575 kb on + strand at 4008.662 kb on + strand, within AO356_17760 at 4008.663 kb on - strand, within AO356_17760 at 4008.986 kb on + strand, within AO356_17760 at 4008.987 kb on - strand, within AO356_17760 at 4008.987 kb on - strand, within AO356_17760 at 4009.105 kb on + strand, within AO356_17760 at 4009.106 kb on - strand, within AO356_17760 at 4009.155 kb on - strand, within AO356_17760 at 4009.155 kb on - strand, within AO356_17760 at 4009.169 kb on + strand, within AO356_17760 at 4009.169 kb on + strand, within AO356_17760 at 4009.169 kb on + strand, within AO356_17760 at 4009.170 kb on - strand, within AO356_17760 at 4009.170 kb on - strand, within AO356_17760 at 4009.170 kb on - strand, within AO356_17760 at 4009.307 kb on + strand, within AO356_17760 at 4009.308 kb on - strand, within AO356_17760 at 4009.308 kb on - strand, within AO356_17760 at 4009.308 kb on - strand, within AO356_17760
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,005,750 + +0.8 4,005,750 + +1.5 4,005,750 + +0.2 4,005,751 - -0.8 4,006,123 + AO356_17750 0.51 -0.9 4,006,124 - AO356_17750 0.51 +0.8 4,006,124 - AO356_17750 0.51 -0.3 4,006,124 - AO356_17750 0.51 -0.1 4,006,275 + AO356_17750 0.68 -0.8 4,006,275 + AO356_17750 0.68 -1.1 4,006,276 - AO356_17750 0.68 -0.4 4,006,276 - AO356_17750 0.68 -0.5 4,006,409 - AO356_17750 0.84 -0.8 4,006,585 + -0.3 4,006,585 + +0.8 4,006,586 - +0.0 4,006,586 - -0.1 4,006,586 - +0.4 4,006,586 - +0.2 4,006,586 - +0.1 4,006,586 - +0.0 4,006,588 + +0.4 4,006,633 + +1.6 4,006,634 - +0.3 4,006,685 + +0.2 4,006,730 + -0.4 4,006,730 + -0.4 4,006,730 + -0.5 4,006,731 - +0.6 4,006,731 - -0.1 4,006,731 - +0.8 4,006,742 + -0.7 4,006,742 + +0.1 4,006,743 - +0.6 4,006,805 - +0.8 4,006,828 - -0.1 4,006,910 + AO356_17755 0.12 -1.2 4,006,910 + AO356_17755 0.12 +1.6 4,006,910 + AO356_17755 0.12 -0.3 4,006,910 + AO356_17755 0.12 +0.1 4,006,910 + AO356_17755 0.12 -0.4 4,006,910 + AO356_17755 0.12 -0.1 4,006,911 - AO356_17755 0.12 +0.5 4,006,911 - AO356_17755 0.12 -0.1 4,006,911 - AO356_17755 0.12 +0.5 4,007,283 - AO356_17755 0.35 -0.8 4,007,545 + AO356_17755 0.51 +0.1 4,007,545 + AO356_17755 0.51 -1.3 4,007,553 + AO356_17755 0.52 -0.2 4,007,554 - AO356_17755 0.52 +0.1 4,007,554 - AO356_17755 0.52 +0.3 4,007,554 - AO356_17755 0.52 -2.0 4,007,629 + AO356_17755 0.56 -0.0 4,007,630 - AO356_17755 0.56 -3.0 4,007,872 + AO356_17755 0.71 -0.2 4,007,872 + AO356_17755 0.71 -0.5 4,007,872 + AO356_17755 0.71 +0.8 4,007,872 + AO356_17755 0.71 -0.3 4,007,873 - AO356_17755 0.71 +0.4 4,007,873 - AO356_17755 0.71 -0.3 4,008,115 - AO356_17755 0.86 +2.1 4,008,125 - AO356_17755 0.87 +0.6 4,008,142 + AO356_17755 0.88 -0.2 4,008,142 + AO356_17755 0.88 -0.0 4,008,142 + AO356_17755 0.88 +1.2 4,008,143 - AO356_17755 0.88 +0.8 4,008,143 - AO356_17755 0.88 -0.9 4,008,143 - AO356_17755 0.88 -0.9 4,008,143 - AO356_17755 0.88 +0.2 4,008,143 - AO356_17755 0.88 +1.0 4,008,143 - AO356_17755 0.88 +0.0 4,008,143 - AO356_17755 0.88 +1.6 4,008,184 + +0.5 4,008,184 + +0.9 4,008,184 + +0.7 4,008,184 + -0.2 4,008,184 + -0.3 4,008,184 + -1.1 4,008,184 + +0.3 4,008,184 + -0.3 4,008,184 + +0.7 4,008,184 + +0.1 4,008,184 + +1.1 4,008,185 - +1.6 4,008,185 - +0.4 4,008,185 - +0.3 4,008,402 - -0.1 4,008,402 - +1.0 4,008,402 - +0.8 4,008,575 + -0.2 4,008,662 + AO356_17760 0.19 +0.4 4,008,663 - AO356_17760 0.19 +1.1 4,008,986 + AO356_17760 0.54 -0.2 4,008,987 - AO356_17760 0.54 +0.5 4,008,987 - AO356_17760 0.54 +0.1 4,009,105 + AO356_17760 0.67 -0.1 4,009,106 - AO356_17760 0.67 +0.3 4,009,155 - AO356_17760 0.72 +0.7 4,009,155 - AO356_17760 0.72 +0.2 4,009,169 + AO356_17760 0.74 +0.9 4,009,169 + AO356_17760 0.74 -0.1 4,009,169 + AO356_17760 0.74 -0.2 4,009,170 - AO356_17760 0.74 +0.1 4,009,170 - AO356_17760 0.74 +0.5 4,009,170 - AO356_17760 0.74 +0.2 4,009,307 + AO356_17760 0.88 +0.4 4,009,308 - AO356_17760 0.89 -0.1 4,009,308 - AO356_17760 0.89 +0.3 4,009,308 - AO356_17760 0.89 -0.3
Or see this region's nucleotide sequence