Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2949 and Dsui_2950 are separated by 132 nucleotides Dsui_2950 and Dsui_2951 are separated by 2 nucleotides
Dsui_2949: Dsui_2949 - Fe2+-dicitrate sensor, membrane component, at 3,155,147 to 3,156,166
_2949
Dsui_2950: Dsui_2950 - TonB-dependent siderophore receptor, at 3,156,299 to 3,158,701
_2950
Dsui_2951: Dsui_2951 - putative iron-regulated membrane protein, at 3,158,704 to 3,159,981
_2951
Position (kb)
3156
3157
3158
3159 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3155.499 kb on + strand, within Dsui_2949 at 3155.616 kb on - strand, within Dsui_2949 at 3155.852 kb on - strand at 3155.910 kb on + strand, within Dsui_2949 at 3156.078 kb on - strand at 3156.111 kb on + strand at 3156.116 kb on + strand at 3156.160 kb on + strand at 3156.160 kb on + strand at 3156.168 kb on - strand at 3156.181 kb on - strand at 3156.251 kb on + strand at 3156.499 kb on - strand at 3156.539 kb on - strand at 3156.601 kb on - strand, within Dsui_2950 at 3156.607 kb on - strand at 3156.626 kb on + strand, within Dsui_2950 at 3156.627 kb on + strand, within Dsui_2950 at 3156.770 kb on + strand, within Dsui_2950 at 3156.801 kb on - strand at 3156.882 kb on - strand at 3156.945 kb on + strand at 3156.945 kb on + strand, within Dsui_2950 at 3156.953 kb on - strand, within Dsui_2950 at 3156.991 kb on + strand, within Dsui_2950 at 3156.991 kb on + strand at 3157.021 kb on + strand, within Dsui_2950 at 3157.028 kb on + strand, within Dsui_2950 at 3157.076 kb on - strand at 3157.182 kb on + strand, within Dsui_2950 at 3157.279 kb on + strand, within Dsui_2950 at 3157.448 kb on - strand, within Dsui_2950 at 3157.515 kb on + strand, within Dsui_2950 at 3157.636 kb on + strand, within Dsui_2950 at 3157.644 kb on + strand, within Dsui_2950 at 3157.893 kb on + strand, within Dsui_2950 at 3157.901 kb on - strand, within Dsui_2950 at 3157.905 kb on + strand at 3158.028 kb on + strand, within Dsui_2950 at 3158.084 kb on - strand, within Dsui_2950 at 3158.089 kb on - strand at 3158.152 kb on + strand, within Dsui_2950 at 3158.240 kb on + strand at 3158.276 kb on - strand at 3158.284 kb on - strand at 3158.314 kb on + strand at 3158.326 kb on + strand at 3158.532 kb on + strand at 3158.754 kb on + strand at 3158.837 kb on - strand, within Dsui_2951 at 3158.971 kb on - strand, within Dsui_2951 at 3158.977 kb on + strand, within Dsui_2951 at 3159.002 kb on + strand, within Dsui_2951 at 3159.020 kb on - strand, within Dsui_2951 at 3159.023 kb on + strand, within Dsui_2951 at 3159.138 kb on + strand, within Dsui_2951 at 3159.153 kb on + strand at 3159.210 kb on + strand at 3159.210 kb on + strand at 3159.218 kb on - strand, within Dsui_2951 at 3159.402 kb on + strand at 3159.428 kb on + strand, within Dsui_2951 at 3159.442 kb on + strand, within Dsui_2951 at 3159.471 kb on + strand, within Dsui_2951 at 3159.484 kb on + strand, within Dsui_2951
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 3,155,499 + Dsui_2949 0.35 +0.4 3,155,616 - Dsui_2949 0.46 +1.6 3,155,852 - -0.1 3,155,910 + Dsui_2949 0.75 +0.9 3,156,078 - +0.9 3,156,111 + +0.6 3,156,116 + +0.9 3,156,160 + -0.2 3,156,160 + -0.3 3,156,168 - +2.2 3,156,181 - +1.2 3,156,251 + -2.0 3,156,499 - +2.2 3,156,539 - +0.6 3,156,601 - Dsui_2950 0.13 -0.4 3,156,607 - +1.8 3,156,626 + Dsui_2950 0.14 -0.2 3,156,627 + Dsui_2950 0.14 -2.7 3,156,770 + Dsui_2950 0.20 +0.2 3,156,801 - +2.2 3,156,882 - +2.2 3,156,945 + +2.2 3,156,945 + Dsui_2950 0.27 +0.1 3,156,953 - Dsui_2950 0.27 +1.5 3,156,991 + Dsui_2950 0.29 -0.3 3,156,991 + +0.2 3,157,021 + Dsui_2950 0.30 +0.4 3,157,028 + Dsui_2950 0.30 +0.7 3,157,076 - +2.2 3,157,182 + Dsui_2950 0.37 -0.5 3,157,279 + Dsui_2950 0.41 +0.6 3,157,448 - Dsui_2950 0.48 -0.3 3,157,515 + Dsui_2950 0.51 +0.5 3,157,636 + Dsui_2950 0.56 +0.1 3,157,644 + Dsui_2950 0.56 +0.8 3,157,893 + Dsui_2950 0.66 +0.0 3,157,901 - Dsui_2950 0.67 +0.1 3,157,905 + +1.5 3,158,028 + Dsui_2950 0.72 +0.5 3,158,084 - Dsui_2950 0.74 +0.6 3,158,089 - +0.6 3,158,152 + Dsui_2950 0.77 +1.1 3,158,240 + +0.6 3,158,276 - +1.2 3,158,284 - +0.6 3,158,314 + +1.6 3,158,326 + -0.6 3,158,532 + +0.2 3,158,754 + -1.0 3,158,837 - Dsui_2951 0.10 -0.3 3,158,971 - Dsui_2951 0.21 -1.6 3,158,977 + Dsui_2951 0.21 -0.5 3,159,002 + Dsui_2951 0.23 +0.3 3,159,020 - Dsui_2951 0.25 -1.3 3,159,023 + Dsui_2951 0.25 -0.8 3,159,138 + Dsui_2951 0.34 +0.2 3,159,153 + -0.6 3,159,210 + +0.6 3,159,210 + +0.2 3,159,218 - Dsui_2951 0.40 -1.1 3,159,402 + -0.8 3,159,428 + Dsui_2951 0.57 -0.4 3,159,442 + Dsui_2951 0.58 -0.2 3,159,471 + Dsui_2951 0.60 +0.2 3,159,484 + Dsui_2951 0.61 +0.7
Or see this region's nucleotide sequence