Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1654 and Dsui_1655 overlap by 25 nucleotides Dsui_1655 and Dsui_1656 are separated by 10 nucleotides Dsui_1656 and Dsui_1657 are separated by 9 nucleotides
Dsui_1654: Dsui_1654 - hypothetical protein, at 1,736,672 to 1,738,099
_1654
Dsui_1655: Dsui_1655 - high-affinity Fe2+/Pb2+ permease, at 1,738,075 to 1,738,932
_1655
Dsui_1656: Dsui_1656 - hypothetical protein, at 1,738,943 to 1,739,290
_1656
Dsui_1657: Dsui_1657 - carbohydrate-selective porin, at 1,739,300 to 1,740,850
_1657
Position (kb)
1738
1739 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1737.097 kb on + strand, within Dsui_1654 at 1737.097 kb on + strand, within Dsui_1654 at 1737.103 kb on + strand, within Dsui_1654 at 1737.156 kb on - strand, within Dsui_1654 at 1737.279 kb on + strand, within Dsui_1654 at 1737.289 kb on + strand, within Dsui_1654 at 1737.335 kb on + strand, within Dsui_1654 at 1737.435 kb on + strand, within Dsui_1654 at 1737.493 kb on - strand, within Dsui_1654 at 1737.506 kb on - strand, within Dsui_1654 at 1737.533 kb on + strand, within Dsui_1654 at 1737.546 kb on + strand, within Dsui_1654 at 1737.563 kb on - strand, within Dsui_1654 at 1737.580 kb on - strand, within Dsui_1654 at 1737.635 kb on - strand, within Dsui_1654 at 1737.635 kb on - strand, within Dsui_1654 at 1737.710 kb on - strand, within Dsui_1654 at 1737.738 kb on - strand, within Dsui_1654 at 1737.797 kb on - strand, within Dsui_1654 at 1738.123 kb on - strand at 1738.123 kb on - strand at 1738.130 kb on - strand at 1738.173 kb on - strand, within Dsui_1655 at 1738.178 kb on - strand, within Dsui_1655 at 1738.180 kb on - strand, within Dsui_1655 at 1738.228 kb on - strand, within Dsui_1655 at 1738.263 kb on + strand, within Dsui_1655 at 1738.273 kb on + strand, within Dsui_1655 at 1738.313 kb on - strand, within Dsui_1655 at 1738.464 kb on - strand, within Dsui_1655 at 1738.495 kb on + strand, within Dsui_1655 at 1738.522 kb on + strand, within Dsui_1655 at 1738.524 kb on - strand, within Dsui_1655 at 1738.730 kb on - strand, within Dsui_1655 at 1738.742 kb on + strand, within Dsui_1655 at 1738.779 kb on - strand, within Dsui_1655 at 1738.838 kb on - strand, within Dsui_1655 at 1738.864 kb on - strand at 1738.934 kb on + strand at 1738.935 kb on - strand at 1738.977 kb on + strand at 1738.987 kb on + strand at 1739.059 kb on - strand, within Dsui_1656 at 1739.100 kb on - strand, within Dsui_1656 at 1739.100 kb on - strand, within Dsui_1656 at 1739.100 kb on - strand, within Dsui_1656 at 1739.157 kb on - strand, within Dsui_1656 at 1739.340 kb on + strand at 1739.368 kb on + strand at 1739.391 kb on - strand at 1739.554 kb on + strand at 1739.855 kb on + strand, within Dsui_1657 at 1739.909 kb on + strand, within Dsui_1657 at 1739.917 kb on - strand, within Dsui_1657
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 1,737,097 + Dsui_1654 0.30 +0.5 1,737,097 + Dsui_1654 0.30 +1.3 1,737,103 + Dsui_1654 0.30 +0.8 1,737,156 - Dsui_1654 0.34 +0.6 1,737,279 + Dsui_1654 0.43 -1.0 1,737,289 + Dsui_1654 0.43 +0.1 1,737,335 + Dsui_1654 0.46 -1.6 1,737,435 + Dsui_1654 0.53 -0.1 1,737,493 - Dsui_1654 0.57 +0.3 1,737,506 - Dsui_1654 0.58 +0.4 1,737,533 + Dsui_1654 0.60 -1.5 1,737,546 + Dsui_1654 0.61 +0.7 1,737,563 - Dsui_1654 0.62 -0.0 1,737,580 - Dsui_1654 0.64 +0.7 1,737,635 - Dsui_1654 0.67 +0.4 1,737,635 - Dsui_1654 0.67 +0.1 1,737,710 - Dsui_1654 0.73 +0.3 1,737,738 - Dsui_1654 0.75 +2.3 1,737,797 - Dsui_1654 0.79 -0.3 1,738,123 - +0.2 1,738,123 - +0.5 1,738,130 - +1.2 1,738,173 - Dsui_1655 0.11 -0.0 1,738,178 - Dsui_1655 0.12 +0.4 1,738,180 - Dsui_1655 0.12 -0.2 1,738,228 - Dsui_1655 0.18 +0.7 1,738,263 + Dsui_1655 0.22 +0.1 1,738,273 + Dsui_1655 0.23 -0.7 1,738,313 - Dsui_1655 0.28 -0.0 1,738,464 - Dsui_1655 0.45 +1.1 1,738,495 + Dsui_1655 0.49 +1.1 1,738,522 + Dsui_1655 0.52 +0.7 1,738,524 - Dsui_1655 0.52 +1.7 1,738,730 - Dsui_1655 0.76 -0.4 1,738,742 + Dsui_1655 0.78 +1.0 1,738,779 - Dsui_1655 0.82 -0.3 1,738,838 - Dsui_1655 0.89 +0.1 1,738,864 - +1.3 1,738,934 + +0.7 1,738,935 - -0.1 1,738,977 + -2.0 1,738,987 + -0.0 1,739,059 - Dsui_1656 0.33 -0.2 1,739,100 - Dsui_1656 0.45 +0.3 1,739,100 - Dsui_1656 0.45 +0.3 1,739,100 - Dsui_1656 0.45 +0.1 1,739,157 - Dsui_1656 0.61 +0.9 1,739,340 + -0.1 1,739,368 + +0.7 1,739,391 - -1.7 1,739,554 + +1.7 1,739,855 + Dsui_1657 0.36 +0.2 1,739,909 + Dsui_1657 0.39 +0.3 1,739,917 - Dsui_1657 0.40 +0.3
Or see this region's nucleotide sequence