Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1024 and Dsui_1025 are separated by 170 nucleotides Dsui_1025 and Dsui_1026 are separated by 14 nucleotides
Dsui_1024: Dsui_1024 - signal recognition particle-docking protein FtsY, at 1,056,323 to 1,057,327
_1024
Dsui_1025: Dsui_1025 - putative Zn-dependent peptidase, at 1,057,498 to 1,058,865
_1025
Dsui_1026: Dsui_1026 - putative Zn-dependent peptidase, at 1,058,880 to 1,060,172
_1026
Position (kb)
1057
1058
1059 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1057.377 kb on - strand at 1057.381 kb on - strand at 1057.595 kb on + strand at 1057.652 kb on + strand, within Dsui_1025 at 1057.652 kb on + strand, within Dsui_1025 at 1057.942 kb on + strand, within Dsui_1025 at 1057.983 kb on + strand, within Dsui_1025 at 1058.020 kb on + strand, within Dsui_1025 at 1058.072 kb on + strand, within Dsui_1025 at 1058.072 kb on - strand, within Dsui_1025 at 1058.126 kb on + strand, within Dsui_1025 at 1058.228 kb on - strand at 1058.291 kb on - strand, within Dsui_1025 at 1058.317 kb on - strand, within Dsui_1025 at 1058.343 kb on + strand, within Dsui_1025 at 1058.379 kb on - strand at 1058.420 kb on - strand at 1058.426 kb on - strand at 1058.699 kb on + strand, within Dsui_1025 at 1058.785 kb on + strand at 1058.800 kb on - strand at 1058.936 kb on + strand at 1058.959 kb on + strand at 1059.088 kb on + strand, within Dsui_1026 at 1059.199 kb on + strand, within Dsui_1026 at 1059.302 kb on - strand at 1059.479 kb on + strand, within Dsui_1026 at 1059.533 kb on + strand, within Dsui_1026 at 1059.534 kb on + strand, within Dsui_1026 at 1059.693 kb on + strand, within Dsui_1026 at 1059.780 kb on + strand at 1059.788 kb on - strand at 1059.810 kb on - strand, within Dsui_1026
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 1,057,377 - +0.4 1,057,381 - -0.0 1,057,595 + -0.3 1,057,652 + Dsui_1025 0.11 +0.0 1,057,652 + Dsui_1025 0.11 -0.7 1,057,942 + Dsui_1025 0.32 -0.9 1,057,983 + Dsui_1025 0.35 -1.2 1,058,020 + Dsui_1025 0.38 +0.1 1,058,072 + Dsui_1025 0.42 -1.2 1,058,072 - Dsui_1025 0.42 -0.7 1,058,126 + Dsui_1025 0.46 -1.6 1,058,228 - +2.3 1,058,291 - Dsui_1025 0.58 -0.6 1,058,317 - Dsui_1025 0.60 +0.5 1,058,343 + Dsui_1025 0.62 -0.5 1,058,379 - +3.3 1,058,420 - +3.3 1,058,426 - +3.3 1,058,699 + Dsui_1025 0.88 -0.4 1,058,785 + -0.0 1,058,800 - +1.0 1,058,936 + -0.3 1,058,959 + -0.5 1,059,088 + Dsui_1026 0.16 -0.6 1,059,199 + Dsui_1026 0.25 -0.1 1,059,302 - +1.3 1,059,479 + Dsui_1026 0.46 +0.5 1,059,533 + Dsui_1026 0.51 +0.6 1,059,534 + Dsui_1026 0.51 +0.5 1,059,693 + Dsui_1026 0.63 -0.3 1,059,780 + +2.3 1,059,788 - +1.3 1,059,810 - Dsui_1026 0.72 -0.1
Or see this region's nucleotide sequence