Strain Fitness in Shewanella amazonensis SB2B around Sama_3362

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,988,589	-				+0.2
3,988,589	-				+1.6
3,988,589	-				-1.7
3,988,589	-				-2.3
3,988,604	-				+0.4
3,988,604	-				-0.5
3,988,604	-				-1.3
3,988,604	-				+1.9
3,988,604	-				-1.3
3,988,604	-				-3.1
3,988,604	-				-0.2
3,988,604	-				-1.1
3,988,604	-				-1.0
3,988,608	-				-2.8
3,988,608	-				-1.0
3,988,608	-				+1.1
3,988,645	-		Sama_3361	0.13	-0.6
3,988,645	-		Sama_3361	0.13	-2.3
3,988,645	-		Sama_3361	0.13	+0.0
3,988,645	-		Sama_3361	0.13	-1.2
3,988,645	-		Sama_3361	0.13	+1.4
3,988,645	-		Sama_3361	0.13	-1.3
3,988,645	-		Sama_3361	0.13	-2.1
3,988,645	-		Sama_3361	0.13	+0.3
3,988,645	-		Sama_3361	0.13	+0.3
3,988,657	-		Sama_3361	0.14	+0.3
3,988,657	-		Sama_3361	0.14	+0.1
3,988,657	-		Sama_3361	0.14	-0.6
3,988,700	+		Sama_3361	0.21	-1.0
3,988,700	+		Sama_3361	0.21	-1.5
3,988,700	+		Sama_3361	0.21	-0.1
3,988,700	+		Sama_3361	0.21	+0.5
3,988,700	+		Sama_3361	0.21	+0.0
3,988,700	+		Sama_3361	0.21	-0.6
3,988,700	+		Sama_3361	0.21	-0.6
3,988,700	+		Sama_3361	0.21	-0.2
3,988,700	+		Sama_3361	0.21	-0.7
3,988,700	+		Sama_3361	0.21	+0.9
3,988,701	-		Sama_3361	0.21	-0.3
3,988,701	-		Sama_3361	0.21	+0.1
3,988,701	-		Sama_3361	0.21	-2.3
3,988,701	-		Sama_3361	0.21	+0.4
3,988,702	+		Sama_3361	0.21	-2.5
3,988,702	+		Sama_3361	0.21	+1.2
3,988,702	+		Sama_3361	0.21	-0.5
3,988,702	+		Sama_3361	0.21	+1.8
3,988,702	+		Sama_3361	0.21	-1.8
3,988,703	-		Sama_3361	0.21	-1.0
3,988,703	-		Sama_3361	0.21	-1.3
3,988,703	-		Sama_3361	0.21	+0.2
3,988,703	-		Sama_3361	0.21	-0.1
3,988,885	+		Sama_3361	0.48	-2.5
3,988,886	-		Sama_3361	0.48	+0.2
3,988,886	-		Sama_3361	0.48	-0.9
3,988,886	-		Sama_3361	0.48	+0.2
3,988,891	+		Sama_3361	0.49	-0.4
3,988,897	+		Sama_3361	0.49	-1.0
3,988,897	+		Sama_3361	0.49	-0.7
3,988,953	+		Sama_3361	0.58	+1.9
3,988,953	+		Sama_3361	0.58	+0.1
3,988,953	+		Sama_3361	0.58	-0.5
3,988,953	+		Sama_3361	0.58	+0.5
3,988,953	+		Sama_3361	0.58	+2.1
3,988,953	+		Sama_3361	0.58	+1.2
3,988,953	+		Sama_3361	0.58	-0.5
3,988,953	+		Sama_3361	0.58	-0.8
3,988,953	+		Sama_3361	0.58	-0.0
3,988,953	+		Sama_3361	0.58	-1.1
3,988,953	+		Sama_3361	0.58	-0.7
3,988,953	+		Sama_3361	0.58	-1.5
3,988,953	+		Sama_3361	0.58	-0.5
3,988,953	+		Sama_3361	0.58	-2.0
3,988,954	-		Sama_3361	0.58	-1.0
3,988,954	-		Sama_3361	0.58	-0.6
3,988,954	-		Sama_3361	0.58	+0.0
3,988,954	-		Sama_3361	0.58	-1.3
3,988,954	-		Sama_3361	0.58	-1.4
3,988,954	-		Sama_3361	0.58	-0.3
3,988,954	-		Sama_3361	0.58	-1.3
3,988,954	-		Sama_3361	0.58	-1.1
3,988,986	+		Sama_3361	0.62	+0.2
3,988,986	+		Sama_3361	0.62	+0.0
3,988,996	+		Sama_3361	0.64	+0.0
3,988,996	+		Sama_3361	0.64	+0.4
3,988,996	+		Sama_3361	0.64	-1.0
3,988,997	-		Sama_3361	0.64	+1.0
3,988,997	-		Sama_3361	0.64	-1.0
3,989,023	+		Sama_3361	0.68	-0.0
3,989,023	+		Sama_3361	0.68	-1.3
3,989,024	-		Sama_3361	0.68	-0.8
3,989,024	-		Sama_3361	0.68	-0.0
3,989,024	-		Sama_3361	0.68	-1.5
3,989,224	+				-0.1
3,989,225	-				-1.3
3,989,251	+				-0.4
3,989,251	+				-2.8
3,989,252	-				-1.7
3,989,252	-				+1.5
3,989,252	-				-1.0
3,989,252	-				-2.6
3,989,252	-				-0.8
3,989,252	-				-1.0
3,989,252	-				-0.7
3,989,907	-				+0.6
3,990,036	-				-0.7
3,990,036	-				-3.1
3,990,043	+				-0.5
3,990,088	-				+2.6
3,990,185	+		Sama_3363	0.18	+2.6
3,990,185	+		Sama_3363	0.18	+3.4
3,990,185	+		Sama_3363	0.18	+2.4
3,990,186	-		Sama_3363	0.19	+0.4
3,990,186	-		Sama_3363	0.19	+4.4
3,990,189	+		Sama_3363	0.19	+0.6
3,990,212	+		Sama_3363	0.25	+3.4
3,990,304	-		Sama_3363	0.50	+1.3
3,990,310	+		Sama_3363	0.51	-0.5
3,990,323	+		Sama_3363	0.55	+1.6
3,990,400	-		Sama_3363	0.75	+0.3
3,990,408	+		Sama_3363	0.77	+4.8
3,990,409	-		Sama_3363	0.77	+0.7
3,990,432	-		Sama_3363	0.83	+0.3
3,990,432	-		Sama_3363	0.83	-0.5
3,990,453	+		Sama_3363	0.89	-0.1
3,990,493	+				+1.1
3,990,494	-				-2.3
3,990,526	+		Sama_3364	0.10	-1.4
3,990,526	+		Sama_3364	0.10	-2.5
3,990,526	+		Sama_3364	0.10	-0.3
3,990,527	-		Sama_3364	0.11	-0.7
3,990,527	-		Sama_3364	0.11	-2.0
3,990,612	+		Sama_3364	0.57	-1.1
3,990,612	+		Sama_3364	0.57	-0.6
3,990,612	+		Sama_3364	0.57	+1.4
3,990,613	-		Sama_3364	0.58	+0.9
3,990,613	-		Sama_3364	0.58	-1.1
3,990,613	-		Sama_3364	0.58	+0.1
3,990,613	-		Sama_3364	0.58	+1.1
3,990,613	-		Sama_3364	0.58	+1.7
3,990,613	-		Sama_3364	0.58	+0.7
3,990,614	+		Sama_3364	0.58	+0.4
3,990,614	+		Sama_3364	0.58	+2.2
3,990,615	-		Sama_3364	0.59	+0.3
3,990,631	+		Sama_3364	0.68	+0.9
3,990,644	+		Sama_3364	0.75	-0.3
3,990,645	-		Sama_3364	0.75	+0.9
3,990,645	-		Sama_3364	0.75	+0.6
3,990,659	+		Sama_3364	0.83	-1.1
3,990,659	+		Sama_3364	0.83	-1.0
3,990,659	+		Sama_3364	0.83	-0.1
3,990,660	-		Sama_3364	0.84	+0.7
3,990,660	-		Sama_3364	0.84	+0.6
3,990,680	-				-0.5
3,990,687	+				-0.5
3,990,688	-				+1.5
3,990,688	-				-1.1
3,990,691	-				-0.9
3,990,846	-		Sama_3365	0.15	+0.9
3,990,893	-		Sama_3365	0.21	+0.3
3,990,893	-		Sama_3365	0.21	-1.3