Strain Fitness in Shewanella amazonensis SB2B around Sama_3326

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,952,512	-		Sama_3325	0.16	-2.1
3,952,538	+		Sama_3325	0.20	-0.6
3,952,539	-		Sama_3325	0.20	-0.9
3,952,539	-		Sama_3325	0.20	-0.9
3,952,554	+		Sama_3325	0.22	+0.5
3,952,555	-		Sama_3325	0.22	-1.6
3,952,597	+		Sama_3325	0.27	+0.8
3,952,597	+		Sama_3325	0.27	+0.6
3,952,597	+		Sama_3325	0.27	-1.0
3,952,598	-		Sama_3325	0.27	+1.2
3,952,630	+		Sama_3325	0.31	-0.4
3,952,631	-		Sama_3325	0.31	+0.2
3,952,631	-		Sama_3325	0.31	+0.7
3,952,654	+		Sama_3325	0.34	-1.4
3,952,654	+		Sama_3325	0.34	+1.5
3,952,718	+		Sama_3325	0.42	-0.2
3,952,719	-		Sama_3325	0.42	-1.1
3,952,719	-		Sama_3325	0.42	-1.3
3,952,719	-		Sama_3325	0.42	-0.0
3,952,719	-		Sama_3325	0.42	-0.1
3,952,797	+		Sama_3325	0.52	-1.2
3,952,798	-		Sama_3325	0.52	-0.6
3,952,798	-		Sama_3325	0.52	+0.2
3,952,798	-		Sama_3325	0.52	+0.9
3,952,798	-		Sama_3325	0.52	+0.5
3,952,798	-		Sama_3325	0.52	-1.5
3,952,798	-		Sama_3325	0.52	+0.3
3,953,074	+		Sama_3325	0.87	+1.8
3,953,074	+		Sama_3325	0.87	-2.1
3,953,074	+		Sama_3325	0.87	-1.9
3,953,074	+		Sama_3325	0.87	+0.5
3,953,075	-		Sama_3325	0.87	-2.1
3,953,075	-		Sama_3325	0.87	-0.5
3,953,075	-		Sama_3325	0.87	-0.2
3,953,075	-		Sama_3325	0.87	-2.3
3,953,075	-		Sama_3325	0.87	-0.2
3,953,075	-		Sama_3325	0.87	-0.8
3,953,075	-		Sama_3325	0.87	+1.8
3,953,078	+		Sama_3325	0.87	+0.2
3,953,078	+		Sama_3325	0.87	-1.8
3,953,078	+		Sama_3325	0.87	-0.6
3,953,078	+		Sama_3325	0.87	-0.2
3,953,078	+		Sama_3325	0.87	+0.2
3,953,078	+		Sama_3325	0.87	-1.3
3,953,078	+		Sama_3325	0.87	-1.9
3,953,078	+		Sama_3325	0.87	+0.2
3,953,078	+		Sama_3325	0.87	+0.8
3,953,078	+		Sama_3325	0.87	+0.1
3,953,078	+		Sama_3325	0.87	-1.6
3,953,078	+		Sama_3325	0.87	-0.7
3,953,079	-		Sama_3325	0.87	+0.2
3,953,079	-		Sama_3325	0.87	-0.5
3,953,079	-		Sama_3325	0.87	+0.8
3,953,079	-		Sama_3325	0.87	-1.2
3,953,079	-		Sama_3325	0.87	+1.4
3,953,079	-		Sama_3325	0.87	+0.0
3,953,079	-		Sama_3325	0.87	+1.7
3,953,079	-		Sama_3325	0.87	-1.2
3,953,079	-		Sama_3325	0.87	-0.5
3,953,079	-		Sama_3325	0.87	-0.3
3,953,079	-		Sama_3325	0.87	-0.8
3,953,091	+		Sama_3325	0.89	-1.6
3,953,092	-		Sama_3325	0.89	-1.0
3,953,092	-		Sama_3325	0.89	+1.1
3,953,092	-		Sama_3325	0.89	-0.3
3,953,092	-		Sama_3325	0.89	+2.0
3,953,092	-		Sama_3325	0.89	-2.0
3,953,131	+				-3.5
3,953,131	+				-0.6
3,953,131	+				-2.8
3,953,131	+				-0.8
3,953,166	+				-1.0
3,953,166	+				-0.2
3,953,167	-				-1.5
3,953,167	-				+0.8
3,953,173	+				-0.8
3,953,173	+				-1.0
3,953,173	+				+0.1
3,953,174	-				+1.5
3,953,174	-				-0.3
3,953,261	-				-0.1
3,953,263	+				+0.0
3,953,264	-				+0.8
3,953,264	-				-1.1
3,953,264	-				+1.3
3,953,266	+				-2.2
3,953,284	+				-0.3
3,953,285	-				+1.8
3,953,285	-				+0.5
3,953,293	+				+0.2
3,953,294	-				+0.3
3,953,294	-				+0.4
3,953,294	-				-1.3
3,953,297	+				-2.2
3,953,297	+				+1.3
3,953,297	+				-0.9
3,953,298	-				+0.2
3,953,298	-				+1.1
3,953,298	-				-0.5
3,953,410	+				+0.3
3,953,411	-				-0.8
3,953,415	+				-3.3
3,953,441	+				+0.1
3,953,442	-				+1.3
3,953,442	-				-1.0
3,953,442	-				-0.2
3,953,518	+		Sama_3326	0.18	+1.0
3,953,518	+		Sama_3326	0.18	+1.2
3,953,518	+		Sama_3326	0.18	+0.4
3,953,518	+		Sama_3326	0.18	-0.9
3,953,518	+		Sama_3326	0.18	-1.0
3,953,518	+		Sama_3326	0.18	-0.9
3,953,519	-		Sama_3326	0.19	+0.1
3,953,519	-		Sama_3326	0.19	-0.2
3,953,608	+		Sama_3326	0.42	-0.9
3,953,653	+		Sama_3326	0.53	-2.0
3,953,653	+		Sama_3326	0.53	-1.5
3,953,653	+		Sama_3326	0.53	-1.5
3,953,653	+		Sama_3326	0.53	-0.1
3,953,653	+		Sama_3326	0.53	-1.5
3,953,653	+		Sama_3326	0.53	-1.5
3,953,654	-		Sama_3326	0.53	+0.8
3,953,654	-		Sama_3326	0.53	+0.2
3,953,654	-		Sama_3326	0.53	-0.3
3,953,654	-		Sama_3326	0.53	+1.7
3,953,654	-		Sama_3326	0.53	-0.3
3,953,695	+		Sama_3326	0.64	-0.2
3,953,696	-		Sama_3326	0.64	+0.2
3,953,727	+		Sama_3326	0.72	+2.0
3,953,728	-		Sama_3326	0.72	+2.8
3,953,728	-		Sama_3326	0.72	-0.5
3,953,728	-		Sama_3326	0.72	-0.5
3,953,728	-		Sama_3326	0.72	-1.6
3,953,728	-		Sama_3326	0.72	-1.3
3,953,728	-		Sama_3326	0.72	+0.9
3,953,728	-		Sama_3326	0.72	-0.1
3,953,833	+				-0.4
3,953,834	-				+0.8
3,953,834	-				+0.5
3,953,910	-				+1.3
3,953,943	-				+1.0
3,953,943	-				-1.5
3,953,951	-				+0.4
3,953,991	+				-1.2
3,953,991	+				-1.0
3,953,991	+				-0.3
3,953,991	+				-2.3
3,953,992	-				-1.3
3,953,992	-				-1.3
3,953,992	-				+2.1
3,953,992	-				-2.9
3,954,000	+				+2.4
3,954,000	+				+1.5
3,954,000	+				+1.2
3,954,123	+		Sama_3327	0.24	-2.6
3,954,123	+		Sama_3327	0.24	+1.4
3,954,124	-		Sama_3327	0.24	-0.6
3,954,124	-		Sama_3327	0.24	-1.3
3,954,124	-		Sama_3327	0.24	+0.9
3,954,124	-		Sama_3327	0.24	-1.6
3,954,124	-		Sama_3327	0.24	+0.2
3,954,125	+		Sama_3327	0.25	+2.3
3,954,126	-		Sama_3327	0.25	+1.6
3,954,126	-		Sama_3327	0.25	+1.2
3,954,126	-		Sama_3327	0.25	-1.0
3,954,126	-		Sama_3327	0.25	+2.5
3,954,126	-		Sama_3327	0.25	-1.5
3,954,134	+		Sama_3327	0.26	+1.8
3,954,135	-		Sama_3327	0.26	+0.4
3,954,168	+		Sama_3327	0.30	+0.8
3,954,222	+		Sama_3327	0.36	-2.5
3,954,222	+		Sama_3327	0.36	-1.3
3,954,222	+		Sama_3327	0.36	+1.2
3,954,223	-		Sama_3327	0.36	+2.8
3,954,223	-		Sama_3327	0.36	+2.5
3,954,223	-		Sama_3327	0.36	+1.6
3,954,254	-		Sama_3327	0.40	-1.8
3,954,324	+		Sama_3327	0.48	-0.1
3,954,325	-		Sama_3327	0.48	+1.0
3,954,346	+		Sama_3327	0.50	-0.2
3,954,378	+		Sama_3327	0.54	-0.6
3,954,379	-		Sama_3327	0.54	-0.2
3,954,379	-		Sama_3327	0.54	+1.2
3,954,379	-		Sama_3327	0.54	-0.7
3,954,379	-		Sama_3327	0.54	+0.9
3,954,379	-		Sama_3327	0.54	+0.6
3,954,400	+		Sama_3327	0.57	+1.2
3,954,400	+		Sama_3327	0.57	+2.5
3,954,400	+		Sama_3327	0.57	-3.1
3,954,400	+		Sama_3327	0.57	+0.7
3,954,400	+		Sama_3327	0.57	-0.9
3,954,401	-		Sama_3327	0.57	-0.4
3,954,517	+		Sama_3327	0.71	+0.2
3,954,517	+		Sama_3327	0.71	-1.5
3,954,517	+		Sama_3327	0.71	+0.9
3,954,518	-		Sama_3327	0.71	-2.3
3,954,518	-		Sama_3327	0.71	-1.0
3,954,518	-		Sama_3327	0.71	+2.2
3,954,518	-		Sama_3327	0.71	-2.0
3,954,518	-		Sama_3327	0.71	+0.5
3,954,540	+		Sama_3327	0.73	+1.2
3,954,540	+		Sama_3327	0.73	-2.8
3,954,540	+		Sama_3327	0.73	+2.8
3,954,541	-		Sama_3327	0.73	-0.5
3,954,592	+		Sama_3327	0.79	-0.6
3,954,606	+		Sama_3327	0.81	-0.4
3,954,621	+		Sama_3327	0.83	-1.8
3,954,638	+		Sama_3327	0.85	+1.7
3,954,652	-		Sama_3327	0.86	+0.8
3,954,652	-		Sama_3327	0.86	+0.0
3,954,652	-		Sama_3327	0.86	+1.4
3,954,732	+				+0.3
3,954,732	+				+1.3
3,954,787	+				+2.3
3,954,788	-				-1.5
3,954,788	-				+1.4
3,954,804	+				-1.6
3,954,804	+				-0.7
3,954,804	+				-2.1
3,954,804	+				+1.7
3,954,804	+				+0.2
3,954,804	+				+0.1
3,954,804	+				+1.3
3,954,804	+				+1.4
3,954,804	+				+0.0
3,954,804	+				-1.8
3,954,805	-				+1.3
3,954,805	-				-0.6
3,954,805	-				+0.8