Strain Fitness in Shewanella amazonensis SB2B around Sama_3140

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,726,842	+				+2.3
3,726,843	-				+1.5
3,726,843	-				+2.0
3,726,843	-				+0.6
3,726,843	-				+0.3
3,726,862	+				+1.3
3,726,863	-				-2.1
3,726,912	-				-0.5
3,726,913	+				-1.5
3,726,913	+				-0.9
3,726,913	+				+0.3
3,726,913	+				-1.1
3,726,914	-				-0.8
3,726,914	-				+1.4
3,726,916	-				-1.0
3,726,919	-				-1.9
3,726,923	+				-0.3
3,726,981	+				+1.8
3,727,101	+		Sama_3139	0.23	-1.6
3,727,102	-		Sama_3139	0.23	+0.3
3,727,231	-		Sama_3139	0.40	-1.7
3,727,263	+		Sama_3139	0.45	+1.4
3,727,263	+		Sama_3139	0.45	+1.6
3,727,263	+		Sama_3139	0.45	+0.1
3,727,263	+		Sama_3139	0.45	+0.7
3,727,263	+		Sama_3139	0.45	+2.9
3,727,263	+		Sama_3139	0.45	-0.2
3,727,263	+		Sama_3139	0.45	+0.1
3,727,264	-		Sama_3139	0.45	-2.0
3,727,264	-		Sama_3139	0.45	+1.7
3,727,321	-		Sama_3139	0.52	+2.4
3,727,329	+		Sama_3139	0.54	+1.2
3,727,330	-		Sama_3139	0.54	-0.4
3,727,330	-		Sama_3139	0.54	-0.9
3,727,352	+		Sama_3139	0.57	-1.9
3,727,352	+		Sama_3139	0.57	-1.6
3,727,352	+		Sama_3139	0.57	-0.1
3,727,353	-		Sama_3139	0.57	+0.6
3,727,353	-		Sama_3139	0.57	-0.2
3,727,354	+		Sama_3139	0.57	+1.7
3,727,354	+		Sama_3139	0.57	+1.2
3,727,354	+		Sama_3139	0.57	-1.5
3,727,354	+		Sama_3139	0.57	+1.6
3,727,354	+		Sama_3139	0.57	-0.0
3,727,354	+		Sama_3139	0.57	-0.1
3,727,354	+		Sama_3139	0.57	+2.5
3,727,355	-		Sama_3139	0.57	-1.3
3,727,355	-		Sama_3139	0.57	-0.5
3,727,355	-		Sama_3139	0.57	+0.5
3,727,355	-		Sama_3139	0.57	-0.8
3,727,355	-		Sama_3139	0.57	-0.2
3,727,355	-		Sama_3139	0.57	+0.8
3,727,408	-		Sama_3139	0.64	-0.3
3,727,408	-		Sama_3139	0.64	-2.3
3,727,408	-		Sama_3139	0.64	+1.5
3,727,408	-		Sama_3139	0.64	-0.8
3,727,413	+		Sama_3139	0.65	-1.1
3,727,413	+		Sama_3139	0.65	+1.0
3,727,414	-		Sama_3139	0.65	+0.8
3,727,469	+		Sama_3139	0.72	-0.6
3,727,470	-		Sama_3139	0.73	+0.4
3,727,470	-		Sama_3139	0.73	+1.2
3,727,470	-		Sama_3139	0.73	-0.5
3,727,510	+		Sama_3139	0.78	+0.9
3,727,510	+		Sama_3139	0.78	+2.0
3,727,510	+		Sama_3139	0.78	+1.9
3,727,510	+		Sama_3139	0.78	+4.0
3,727,510	+		Sama_3139	0.78	+3.0
3,727,510	+		Sama_3139	0.78	-0.9
3,727,511	-		Sama_3139	0.78	-0.3
3,727,511	-		Sama_3139	0.78	-0.7
3,727,511	-		Sama_3139	0.78	-0.6
3,727,511	-		Sama_3139	0.78	-0.4
3,727,511	-		Sama_3139	0.78	+0.1
3,727,518	+		Sama_3139	0.79	+0.9
3,727,519	-		Sama_3139	0.79	+3.0
3,727,519	-		Sama_3139	0.79	-0.5
3,727,519	-		Sama_3139	0.79	+0.2
3,727,519	-		Sama_3139	0.79	-1.5
3,727,563	+		Sama_3139	0.85	+0.5
3,727,563	+		Sama_3139	0.85	+0.6
3,727,563	+		Sama_3139	0.85	+1.4
3,727,563	+		Sama_3139	0.85	+0.1
3,727,563	+		Sama_3139	0.85	-1.5
3,727,563	+		Sama_3139	0.85	+2.7
3,727,563	+		Sama_3139	0.85	-1.3
3,727,563	+		Sama_3139	0.85	+1.7
3,727,563	+		Sama_3139	0.85	+0.9
3,727,563	+		Sama_3139	0.85	-0.5
3,727,563	+		Sama_3139	0.85	+0.8
3,727,563	+		Sama_3139	0.85	+0.1
3,727,563	+		Sama_3139	0.85	-0.3
3,727,563	+		Sama_3139	0.85	-0.6
3,727,563	+		Sama_3139	0.85	-1.0
3,727,563	+		Sama_3139	0.85	+0.7
3,727,563	+		Sama_3139	0.85	+2.2
3,727,563	+		Sama_3139	0.85	-0.4
3,727,563	+		Sama_3139	0.85	+0.2
3,727,564	-		Sama_3139	0.85	+0.3
3,727,564	-		Sama_3139	0.85	+0.7
3,727,564	-		Sama_3139	0.85	+0.1
3,727,564	-		Sama_3139	0.85	-2.6
3,727,564	-		Sama_3139	0.85	-1.7
3,727,564	-		Sama_3139	0.85	+1.3
3,727,564	-		Sama_3139	0.85	+1.3
3,727,564	-		Sama_3139	0.85	+1.2
3,727,564	-		Sama_3139	0.85	-0.6
3,727,564	-		Sama_3139	0.85	-1.7
3,727,564	-		Sama_3139	0.85	+1.3
3,727,564	-		Sama_3139	0.85	+0.9
3,727,567	+		Sama_3139	0.86	+1.0
3,727,567	+		Sama_3139	0.86	-0.6
3,727,567	+		Sama_3139	0.86	-0.6
3,727,567	+		Sama_3139	0.86	+1.7
3,727,567	+		Sama_3139	0.86	+1.5
3,727,567	+		Sama_3139	0.86	+1.2
3,727,567	+		Sama_3139	0.86	+0.4
3,727,567	+		Sama_3139	0.86	-0.4
3,727,567	+		Sama_3139	0.86	-0.3
3,727,567	+		Sama_3139	0.86	-0.7
3,727,567	+		Sama_3139	0.86	+0.5
3,727,567	+		Sama_3139	0.86	-0.1
3,727,568	-		Sama_3139	0.86	-0.2
3,727,568	-		Sama_3139	0.86	+2.4
3,727,568	-		Sama_3139	0.86	+1.9
3,727,568	-		Sama_3139	0.86	-0.1
3,727,568	-		Sama_3139	0.86	-3.0
3,727,636	+				+1.2
3,727,636	+				-0.6
3,727,636	+				-2.4
3,727,637	-				-1.0
3,727,638	+				-0.5
3,727,638	+				+0.7
3,727,638	+				-1.9
3,727,639	-				+3.4
3,727,639	-				+0.6
3,727,639	-				-1.8
3,727,639	-				+0.1
3,727,639	-				-0.3
3,727,676	+				+1.9
3,727,676	+				+0.9
3,727,677	-				-0.8
3,727,704	+				-0.0
3,727,704	+				-0.2
3,727,705	-				+2.0
3,727,705	-				-0.2
3,727,715	+				+0.1
3,727,716	-				+0.4
3,727,716	-				+1.2
3,727,716	-				-1.8
3,727,716	-				+2.2
3,727,730	-				+0.4
3,727,873	+				-0.8
3,727,874	-				+1.3
3,727,928	+		Sama_3140	0.15	+1.1
3,727,949	+		Sama_3140	0.18	-0.7
3,727,983	+		Sama_3140	0.22	-1.3
3,727,983	+		Sama_3140	0.22	+0.5
3,727,984	-		Sama_3140	0.22	+0.2
3,728,013	+		Sama_3140	0.26	-0.5
3,728,014	-		Sama_3140	0.26	-0.4
3,728,014	-		Sama_3140	0.26	+1.9
3,728,014	-		Sama_3140	0.26	-0.6
3,728,027	+		Sama_3140	0.28	-1.8
3,728,027	+		Sama_3140	0.28	-0.6
3,728,027	+		Sama_3140	0.28	-0.2
3,728,027	+		Sama_3140	0.28	+4.4
3,728,028	-		Sama_3140	0.28	-0.2
3,728,078	+		Sama_3140	0.35	-0.2
3,728,078	+		Sama_3140	0.35	-1.5
3,728,079	-		Sama_3140	0.35	-0.0
3,728,079	-		Sama_3140	0.35	-0.5
3,728,098	+		Sama_3140	0.37	-0.1
3,728,140	+		Sama_3140	0.43	-1.3
3,728,156	+		Sama_3140	0.45	+2.1
3,728,156	+		Sama_3140	0.45	-0.1
3,728,157	-		Sama_3140	0.45	-0.5
3,728,157	-		Sama_3140	0.45	-1.8
3,728,157	-		Sama_3140	0.45	-1.1
3,728,157	-		Sama_3140	0.45	-2.1
3,728,157	-		Sama_3140	0.45	-1.5
3,728,270	+		Sama_3140	0.60	-1.5
3,728,270	+		Sama_3140	0.60	-0.4
3,728,270	+		Sama_3140	0.60	+1.4
3,728,270	+		Sama_3140	0.60	+0.7
3,728,270	+		Sama_3140	0.60	+0.7
3,728,270	+		Sama_3140	0.60	-1.8
3,728,270	+		Sama_3140	0.60	-0.3
3,728,270	+		Sama_3140	0.60	-1.1
3,728,270	+		Sama_3140	0.60	-1.1
3,728,271	-		Sama_3140	0.60	-0.3
3,728,271	-		Sama_3140	0.60	-2.1
3,728,475	+		Sama_3140	0.87	+0.7
3,728,475	+		Sama_3140	0.87	-0.7
3,728,475	+		Sama_3140	0.87	+0.7
3,728,475	+		Sama_3140	0.87	+0.9
3,728,476	-		Sama_3140	0.87	+1.2
3,728,476	-		Sama_3140	0.87	+1.1
3,728,476	-		Sama_3140	0.87	-0.6
3,728,476	-		Sama_3140	0.87	+1.3
3,728,476	-		Sama_3140	0.87	-0.2
3,728,476	-		Sama_3140	0.87	+0.1
3,728,476	-		Sama_3140	0.87	-1.5
3,728,479	+		Sama_3140	0.88	+1.2
3,728,479	+		Sama_3140	0.88	+0.9
3,728,480	-		Sama_3140	0.88	-0.6
3,728,505	+				+2.1
3,728,505	+				-0.3
3,728,505	+				-1.3
3,728,505	+				-1.8
3,728,505	+				-0.3
3,728,505	+				-2.0
3,728,506	-				-0.2
3,728,506	-				+0.0
3,728,506	-				-0.8
3,728,506	-				-0.6
3,728,506	-				+0.0
3,728,506	-				-0.9
3,728,506	-				-1.1
3,728,506	-				-1.5
3,728,509	+				-1.2
3,728,509	+				-1.6
3,728,509	+				-1.1
3,728,509	+				+1.1
3,728,510	-				-1.1
3,728,510	-				-0.8
3,728,510	-				-0.3
3,728,510	-				-1.4
3,728,518	+				-1.3
3,728,545	+				-1.6
3,728,545	+				+0.0
3,728,545	+				-0.9
3,728,545	+				-0.2
3,728,545	+				+0.4
3,728,545	+				-0.5
3,728,545	+				-0.3
3,728,545	+				+1.0
3,728,545	+				-1.4
3,728,545	+				+1.2
3,728,546	-				+0.2
3,728,546	-				+1.0
3,728,546	-				-0.3
3,728,546	-				-0.2
3,728,546	-				-2.8
3,728,571	+				+1.0
3,728,571	+				-0.6
3,728,571	+				-1.0
3,728,571	+				-1.5
3,728,571	+				-1.3
3,728,571	+				-0.6
3,728,572	-				-0.2
3,728,572	-				-0.1
3,728,572	-				-0.6
3,728,572	-				-0.3
3,728,572	-				+0.1
3,728,572	-				-1.1
3,728,598	+				-1.1
3,728,612	+				-1.5
3,728,613	-				-0.6
3,728,613	-				+3.2
3,728,613	-				-1.5
3,728,673	+		Sama_3141	0.11	+0.8
3,728,723	+		Sama_3141	0.16	-1.9
3,728,723	+		Sama_3141	0.16	+0.7
3,728,723	+		Sama_3141	0.16	-0.1
3,728,723	+		Sama_3141	0.16	+0.6
3,728,724	-		Sama_3141	0.16	+0.9
3,728,839	+		Sama_3141	0.29	-2.3
3,728,861	+		Sama_3141	0.31	+0.3
3,728,862	-		Sama_3141	0.32	-1.3
3,728,879	+		Sama_3141	0.33	+0.7
3,728,879	+		Sama_3141	0.33	+0.7
3,728,879	+		Sama_3141	0.33	-1.1
3,728,880	-		Sama_3141	0.34	-0.3
3,728,978	+		Sama_3141	0.44	-2.6
3,728,978	+		Sama_3141	0.44	-1.7
3,728,978	+		Sama_3141	0.44	-1.9
3,728,978	+		Sama_3141	0.44	+0.1
3,728,978	+		Sama_3141	0.44	-1.3
3,728,978	+		Sama_3141	0.44	-0.9
3,728,978	+		Sama_3141	0.44	-0.1
3,728,978	+		Sama_3141	0.44	-0.2
3,728,978	+		Sama_3141	0.44	-2.0
3,728,979	-		Sama_3141	0.44	-2.0
3,728,979	-		Sama_3141	0.44	+0.9
3,728,979	-		Sama_3141	0.44	+0.7
3,728,979	-		Sama_3141	0.44	-0.3
3,728,979	-		Sama_3141	0.44	+1.4
3,728,979	-		Sama_3141	0.44	-0.6
3,728,979	-		Sama_3141	0.44	+0.2
3,728,979	-		Sama_3141	0.44	-2.9
3,728,979	-		Sama_3141	0.44	-0.5
3,728,988	+		Sama_3141	0.45	-0.6
3,728,988	+		Sama_3141	0.45	+0.6
3,728,988	+		Sama_3141	0.45	+0.7
3,728,989	-		Sama_3141	0.46	-0.1
3,728,989	-		Sama_3141	0.46	-2.0
3,728,989	-		Sama_3141	0.46	-0.5
3,729,009	+		Sama_3141	0.48	+0.9
3,729,010	-		Sama_3141	0.48	-0.3
3,729,010	-		Sama_3141	0.48	-2.1
3,729,010	-		Sama_3141	0.48	+0.4
3,729,021	+		Sama_3141	0.49	-2.0
3,729,088	+		Sama_3141	0.56	+0.1
3,729,088	+		Sama_3141	0.56	-0.6
3,729,088	+		Sama_3141	0.56	-0.3
3,729,088	+		Sama_3141	0.56	+0.5
3,729,088	+		Sama_3141	0.56	-0.5
3,729,088	+		Sama_3141	0.56	+0.1
3,729,088	+		Sama_3141	0.56	-0.3
3,729,088	+		Sama_3141	0.56	+0.2
3,729,088	+		Sama_3141	0.56	+1.7
3,729,088	+		Sama_3141	0.56	+0.7
3,729,088	+		Sama_3141	0.56	-1.3
3,729,088	+		Sama_3141	0.56	+1.1
3,729,089	-		Sama_3141	0.57	-2.3
3,729,089	-		Sama_3141	0.57	-0.6
3,729,089	-		Sama_3141	0.57	-1.5
3,729,089	-		Sama_3141	0.57	+0.2
3,729,089	-		Sama_3141	0.57	-3.1
3,729,089	-		Sama_3141	0.57	+2.0
3,729,089	-		Sama_3141	0.57	-0.6
3,729,089	-		Sama_3141	0.57	-1.1
3,729,089	-		Sama_3141	0.57	-0.8
3,729,089	-		Sama_3141	0.57	+1.5
3,729,089	-		Sama_3141	0.57	+0.1
3,729,089	-		Sama_3141	0.57	-1.9
3,729,089	-		Sama_3141	0.57	+0.7
3,729,089	-		Sama_3141	0.57	-1.0
3,729,153	-		Sama_3141	0.64	-0.7
3,729,277	+		Sama_3141	0.77	-0.5
3,729,335	+		Sama_3141	0.84	-2.2
3,729,335	+		Sama_3141	0.84	-0.1
3,729,335	+		Sama_3141	0.84	-2.0
3,729,335	+		Sama_3141	0.84	+1.4
3,729,399	+				-0.1
3,729,400	-				+1.5
3,729,465	+				-0.3
3,729,499	+				+0.3
3,729,499	+				-0.3
3,729,499	+				+0.4
3,729,499	+				+0.3
3,729,499	+				-0.2
3,729,499	+				-1.3
3,729,499	+				-0.6
3,729,500	-				-0.9
3,729,500	-				-0.6
3,729,500	-				+2.4
3,729,500	-				-0.4
3,729,500	-				-2.1
3,729,500	-				-3.5
3,729,504	+				+0.4
3,729,504	+				-1.9
3,729,504	+				+0.3
3,729,504	+				-0.1
3,729,504	+				-0.3
3,729,504	+				-0.5
3,729,504	+				+0.4
3,729,504	+				-2.2
3,729,505	-				+1.8
3,729,505	-				-0.1
3,729,505	-				-1.5
3,729,505	-				+0.9
3,729,505	-				-3.2
3,729,505	-				-1.9
3,729,505	-				-1.7
3,729,505	-				+0.1
3,729,505	-				-1.3
3,729,505	-				-0.1
3,729,505	-				+0.0
3,729,505	-				+0.1
3,729,567	+				+1.0
3,729,567	+				-1.2
3,729,567	+				+0.0
3,729,567	+				+0.5
3,729,568	-				+1.3
3,729,568	-				-1.5
3,729,568	-				+0.8
3,729,568	-				-1.4