Strain Fitness in Shewanella amazonensis SB2B around Sama_2963

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,526,330	+				+0.8
3,526,394	+				-2.4
3,526,395	-				-1.5
3,526,398	+				+0.2
3,526,399	-				+1.9
3,526,399	-				+0.1
3,526,399	-				+0.1
3,526,399	-				-0.9
3,526,399	-				-2.9
3,526,399	-				+2.8
3,526,412	+				+0.1
3,526,412	+				+1.0
3,526,412	+				-1.2
3,526,412	+				+0.3
3,526,413	-				-1.9
3,526,413	-				+0.2
3,526,413	-				-0.0
3,526,446	+				-0.5
3,526,446	+				+1.4
3,526,447	-				+0.6
3,526,447	-				+1.0
3,526,447	-				+0.3
3,526,447	-				+1.0
3,526,500	-				-0.4
3,526,514	-				+0.6
3,526,514	-				-0.2
3,526,514	-				-1.8
3,526,585	+		Sama_2962	0.35	-2.4
3,526,637	-		Sama_2962	0.60	-1.0
3,526,637	-		Sama_2962	0.60	-1.4
3,526,637	-		Sama_2962	0.60	+0.5
3,526,649	+		Sama_2962	0.65	+0.2
3,526,649	+		Sama_2962	0.65	-0.4
3,526,649	+		Sama_2962	0.65	+0.9
3,526,649	+		Sama_2962	0.65	+1.2
3,526,650	-		Sama_2962	0.66	-0.5
3,526,650	-		Sama_2962	0.66	-0.4
3,526,650	-		Sama_2962	0.66	-0.5
3,526,650	-		Sama_2962	0.66	+0.6
3,526,674	-		Sama_2962	0.77	+1.6
3,526,706	+				-0.9
3,526,707	-				-1.5
3,526,707	-				-0.9
3,526,722	-				+1.1
3,526,826	+				+0.2
3,526,834	-				+0.9
3,526,834	-				+0.9
3,526,856	+				-0.6
3,526,856	+				-0.6
3,526,856	+				-0.2
3,526,857	-				+1.4
3,526,870	+				+1.2
3,526,870	+				-0.8
3,526,909	+				+0.3
3,526,909	+				+0.3
3,526,909	+				+0.7
3,526,910	-				-0.6
3,526,923	+				-0.6
3,526,924	-				+1.6
3,526,967	+				+0.6
3,526,968	-				-0.1
3,526,991	+				-0.2
3,526,991	+				+1.1
3,526,992	-				+2.6
3,527,008	-				+0.6
3,527,008	-				+0.4
3,527,008	-				+0.2
3,527,010	+				+2.0
3,527,022	+				+0.9
3,527,022	+				-0.3
3,527,023	-				-0.7
3,527,023	-				+1.0
3,527,025	+				-1.8
3,527,026	-				+0.8
3,527,045	+				-2.1
3,527,046	-				+1.1
3,527,064	+				-1.9
3,527,064	+				-0.9
3,527,064	+				-0.5
3,527,102	-				-1.9
3,527,125	+				+2.2
3,527,141	-				+0.5
3,527,154	+				+0.6
3,527,154	+				-0.4
3,527,154	+				-0.7
3,527,155	-				-1.5
3,527,202	-		Sama_2963	0.23	+2.3
3,527,202	-		Sama_2963	0.23	+0.6
3,527,276	+		Sama_2963	0.58	-1.8
3,527,276	+		Sama_2963	0.58	+0.2
3,527,277	-		Sama_2963	0.58	+0.2
3,527,277	-		Sama_2963	0.58	-2.1
3,527,277	-		Sama_2963	0.58	+0.1
3,527,277	-		Sama_2963	0.58	-1.4
3,527,277	-		Sama_2963	0.58	+0.4
3,527,305	+		Sama_2963	0.71	-1.5
3,527,340	-		Sama_2963	0.88	+1.5
3,527,351	-				+0.6
3,527,351	-				-0.4
3,527,365	+				+2.3
3,527,365	+				-0.4
3,527,365	+				-0.2
3,527,366	-				+0.3
3,527,366	-				-0.4
3,527,366	-				+0.9
3,527,370	-				+2.2
3,527,399	+				-2.6
3,527,400	-				+1.0
3,527,432	+				-1.7
3,527,483	+				+2.8
3,527,489	+				+0.8
3,527,490	-				+1.8
3,527,493	-				+1.6
3,527,519	+				-2.4
3,527,519	+				+1.0
3,527,522	-				+1.3
3,527,522	-				+0.2
3,527,522	-				+0.1
3,527,593	+				-1.0
3,527,623	-				+1.2
3,527,745	+				-1.3
3,527,745	+				+0.1
3,527,746	-				+0.8
3,527,766	+				+0.1
3,527,767	-				+0.7
3,527,801	+				-0.2
3,527,802	-				+0.1
3,527,881	+				-0.4
3,527,882	-				+0.7
3,527,919	-		Sama_2964	0.10	+0.9
3,527,938	-		Sama_2964	0.12	+1.2
3,527,993	+		Sama_2964	0.17	+1.6
3,527,993	+		Sama_2964	0.17	+1.2
3,527,994	-		Sama_2964	0.17	+0.1
3,527,994	-		Sama_2964	0.17	+0.1
3,527,994	-		Sama_2964	0.17	+0.3
3,528,022	+		Sama_2964	0.20	+0.1
3,528,023	-		Sama_2964	0.20	-0.7
3,528,023	-		Sama_2964	0.20	+0.1
3,528,023	-		Sama_2964	0.20	-2.2
3,528,085	+		Sama_2964	0.25	-0.8
3,528,085	+		Sama_2964	0.25	+0.1
3,528,085	+		Sama_2964	0.25	-0.7
3,528,085	+		Sama_2964	0.25	+0.3
3,528,085	+		Sama_2964	0.25	+1.0
3,528,085	+		Sama_2964	0.25	-0.0
3,528,085	+		Sama_2964	0.25	+0.2
3,528,085	+		Sama_2964	0.25	+1.0
3,528,085	+		Sama_2964	0.25	+0.6
3,528,086	-		Sama_2964	0.25	+3.1
3,528,088	-		Sama_2964	0.25	-0.2
3,528,088	-		Sama_2964	0.25	+0.9
3,528,158	+		Sama_2964	0.31	-0.8
3,528,158	+		Sama_2964	0.31	-1.9
3,528,158	+		Sama_2964	0.31	+0.6
3,528,158	+		Sama_2964	0.31	+0.1
3,528,158	+		Sama_2964	0.31	+2.0
3,528,158	+		Sama_2964	0.31	-0.8
3,528,158	+		Sama_2964	0.31	-1.5
3,528,159	-		Sama_2964	0.32	-1.8
3,528,159	-		Sama_2964	0.32	-1.5
3,528,159	-		Sama_2964	0.32	-0.4
3,528,159	-		Sama_2964	0.32	+1.3
3,528,159	-		Sama_2964	0.32	-2.2
3,528,159	-		Sama_2964	0.32	-1.8
3,528,159	-		Sama_2964	0.32	+0.3
3,528,159	-		Sama_2964	0.32	-1.8
3,528,159	-		Sama_2964	0.32	-0.7
3,528,189	-		Sama_2964	0.34	+0.2
3,528,220	-		Sama_2964	0.37	+0.2
3,528,220	-		Sama_2964	0.37	+0.7
3,528,224	-		Sama_2964	0.37	+1.2
3,528,224	-		Sama_2964	0.37	-0.3
3,528,224	-		Sama_2964	0.37	+0.6
3,528,224	-		Sama_2964	0.37	-0.5
3,528,224	-		Sama_2964	0.37	-0.7
3,528,256	-		Sama_2964	0.40	-0.4
3,528,256	-		Sama_2964	0.40	-0.8
3,528,265	+		Sama_2964	0.41	+0.4
3,528,265	+		Sama_2964	0.41	-1.2
3,528,265	+		Sama_2964	0.41	-1.4
3,528,265	+		Sama_2964	0.41	+1.6
3,528,266	-		Sama_2964	0.41	+0.2
3,528,266	-		Sama_2964	0.41	-1.2
3,528,266	-		Sama_2964	0.41	+2.0
3,528,266	-		Sama_2964	0.41	-0.4
3,528,266	-		Sama_2964	0.41	+2.9
3,528,284	+		Sama_2964	0.43	+0.6
3,528,284	+		Sama_2964	0.43	+1.2
3,528,284	+		Sama_2964	0.43	-1.7
3,528,284	+		Sama_2964	0.43	+1.1
3,528,284	+		Sama_2964	0.43	+0.7
3,528,284	+		Sama_2964	0.43	+1.4
3,528,284	+		Sama_2964	0.43	-0.4
3,528,284	+		Sama_2964	0.43	-0.4
3,528,284	+		Sama_2964	0.43	+1.3
3,528,284	+		Sama_2964	0.43	+2.2
3,528,284	+		Sama_2964	0.43	-0.4
3,528,285	-		Sama_2964	0.43	-1.5
3,528,285	-		Sama_2964	0.43	-1.2
3,528,285	-		Sama_2964	0.43	+0.4
3,528,285	-		Sama_2964	0.43	+1.2
3,528,285	-		Sama_2964	0.43	+1.6
3,528,285	-		Sama_2964	0.43	-0.2
3,528,285	-		Sama_2964	0.43	-0.9
3,528,294	+		Sama_2964	0.43	-0.3
3,528,294	+		Sama_2964	0.43	-0.8
3,528,294	+		Sama_2964	0.43	-1.2