Strain Fitness in Shewanella amazonensis SB2B around Sama_2770

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,309,495	+		Sama_2768	0.76	-0.5
3,309,495	+		Sama_2768	0.76	+0.7
3,309,496	-		Sama_2768	0.76	+2.3
3,309,533	+		Sama_2768	0.79	+1.4
3,309,534	-		Sama_2768	0.79	-1.3
3,309,549	+		Sama_2768	0.80	-1.7
3,309,591	+		Sama_2768	0.84	-1.0
3,309,591	+		Sama_2768	0.84	-0.3
3,309,591	+		Sama_2768	0.84	+1.3
3,309,592	-		Sama_2768	0.84	-0.5
3,309,592	-		Sama_2768	0.84	-0.9
3,309,616	+		Sama_2768	0.86	+0.7
3,309,617	-		Sama_2768	0.86	-2.7
3,309,628	+		Sama_2768	0.87	-2.0
3,309,629	-		Sama_2768	0.87	-1.7
3,309,649	+		Sama_2768	0.88	-1.7
3,309,650	-		Sama_2768	0.88	-0.4
3,309,650	-		Sama_2768	0.88	+1.3
3,309,650	-		Sama_2768	0.88	-0.3
3,309,650	-		Sama_2768	0.88	-0.8
3,309,664	+		Sama_2768	0.89	-0.8
3,309,664	+		Sama_2768	0.89	-0.3
3,309,714	+				+1.5
3,309,715	-				+2.0
3,309,726	+				-0.2
3,309,792	+				+1.3
3,309,811	+				-2.2
3,309,811	+				+0.2
3,309,836	+				+0.5
3,309,836	+				-0.4
3,309,836	+				-0.5
3,309,837	-				+2.1
3,309,837	-				-1.4
3,309,837	-				+0.4
3,309,837	-				-0.3
3,309,837	-				-0.5
3,309,840	+				+0.9
3,309,840	+				-1.5
3,309,840	+				-0.4
3,309,840	+				-1.9
3,309,841	-				+1.2
3,309,841	-				+0.7
3,309,883	-				+0.8
3,309,886	-				-0.5
3,309,886	-				-0.8
3,309,927	+				-1.7
3,309,927	+				+1.1
3,309,928	-				-0.1
3,309,982	+		Sama_2769	0.15	-0.3
3,309,982	+		Sama_2769	0.15	+1.3
3,309,982	+		Sama_2769	0.15	-1.7
3,309,983	-		Sama_2769	0.15	-1.2
3,310,018	+		Sama_2769	0.27	-0.1
3,310,019	-		Sama_2769	0.27	+1.3
3,310,019	-		Sama_2769	0.27	+0.8
3,310,019	-		Sama_2769	0.27	-1.4
3,310,019	-		Sama_2769	0.27	+0.6
3,310,027	+		Sama_2769	0.30	-1.5
3,310,028	-		Sama_2769	0.30	+1.5
3,310,028	-		Sama_2769	0.30	+0.4
3,310,050	+		Sama_2769	0.37	+1.9
3,310,051	-		Sama_2769	0.38	-1.1
3,310,051	-		Sama_2769	0.38	-0.1
3,310,051	-		Sama_2769	0.38	-1.7
3,310,051	-		Sama_2769	0.38	+0.6
3,310,051	-		Sama_2769	0.38	+0.4
3,310,051	-		Sama_2769	0.38	+0.6
3,310,051	-		Sama_2769	0.38	-1.5
3,310,079	+		Sama_2769	0.47	+0.5
3,310,080	-		Sama_2769	0.47	-2.4
3,310,084	+		Sama_2769	0.48	-3.0
3,310,084	+		Sama_2769	0.48	-0.9
3,310,084	+		Sama_2769	0.48	+1.3
3,310,084	+		Sama_2769	0.48	-0.2
3,310,084	+		Sama_2769	0.48	-0.3
3,310,085	-		Sama_2769	0.49	+0.2
3,310,085	-		Sama_2769	0.49	-0.6
3,310,171	+		Sama_2769	0.77	+0.8
3,310,171	+		Sama_2769	0.77	+1.1
3,310,172	-		Sama_2769	0.77	-1.0
3,310,173	+		Sama_2769	0.77	-0.6
3,310,173	+		Sama_2769	0.77	-1.0
3,310,174	-		Sama_2769	0.78	+2.5
3,310,174	-		Sama_2769	0.78	-0.7
3,310,181	+		Sama_2769	0.80	+0.5
3,310,181	+		Sama_2769	0.80	+0.1
3,310,200	-		Sama_2769	0.86	+0.7
3,310,264	+				+0.9
3,310,264	+				-0.2
3,310,264	+				+0.2
3,310,265	-				-0.7
3,310,265	-				+1.2
3,310,265	-				+1.4
3,310,265	-				-1.3
3,310,276	+				-0.2
3,310,277	-				+2.7
3,310,277	-				-0.6
3,310,277	-				+0.4
3,310,277	-				+0.9
3,310,280	+				-1.7
3,310,280	+				-0.3
3,310,280	+				+0.5
3,310,280	+				-0.5
3,310,280	+				+0.5
3,310,280	+				+0.9
3,310,280	+				+0.3
3,310,280	+				-0.2
3,310,280	+				+0.5
3,310,280	+				+0.7
3,310,280	+				+2.3
3,310,280	+				+1.8
3,310,280	+				+1.1
3,310,280	+				-0.7
3,310,280	+				+0.1
3,310,280	+				+1.2
3,310,280	+				+0.6
3,310,280	+				+1.5
3,310,280	+				+3.0
3,310,280	+				-2.0
3,310,281	-				+0.5
3,310,281	-				-0.3
3,310,281	-				+0.3
3,310,281	-				+1.8
3,310,281	-				-0.9
3,310,281	-				+0.1
3,310,281	-				+1.5
3,310,281	-				+0.7
3,310,281	-				-1.2
3,310,281	-				+1.9
3,310,281	-				-1.8
3,310,281	-				+0.0
3,310,281	-				+0.2
3,310,281	-				-1.2
3,310,281	-				-1.8
3,310,281	-				-0.3
3,310,281	-				-1.6
3,310,286	+				+2.5
3,310,286	+				+0.6
3,310,286	+				-1.2
3,310,287	-				-1.7
3,310,330	+				+0.0
3,310,360	+				+1.6
3,310,360	+				-1.1
3,310,361	-				-0.0
3,310,361	-				-0.1
3,310,361	-				-1.5
3,310,433	-				+0.4
3,310,440	+				-0.0
3,310,440	+				-0.9
3,310,451	+				+0.2
3,310,451	+				-0.8
3,310,451	+				+0.1
3,310,452	-				-1.9
3,310,452	-				+0.8
3,310,452	-				+0.5
3,310,452	-				-0.4
3,310,456	+				+0.6
3,310,456	+				-0.2
3,310,474	-				+1.1
3,310,495	+				-0.1
3,310,495	+				-0.3
3,310,495	+				+1.5
3,310,495	+				+0.3
3,310,495	+				-0.3
3,310,495	+				-1.2
3,310,496	-				+0.1
3,310,496	-				-1.6
3,310,496	-				-0.6
3,310,496	-				+1.3
3,310,496	-				+0.5
3,310,496	-				+0.3
3,310,496	-				+2.1
3,310,496	-				-1.9
3,310,519	+				+0.7
3,310,520	-				-0.1
3,310,527	-				+0.1
3,310,538	+		Sama_2770	0.11	-0.3
3,310,570	+		Sama_2770	0.18	+0.8
3,310,571	-		Sama_2770	0.18	+0.5
3,310,639	-		Sama_2770	0.33	-0.1
3,310,639	-		Sama_2770	0.33	-0.8
3,310,719	+		Sama_2770	0.51	+0.3
3,310,719	+		Sama_2770	0.51	-1.7
3,310,719	+		Sama_2770	0.51	-0.0
3,310,719	+		Sama_2770	0.51	-1.2
3,310,720	-		Sama_2770	0.51	+0.4
3,310,720	-		Sama_2770	0.51	+1.2
3,310,723	-		Sama_2770	0.52	-0.7
3,310,740	+		Sama_2770	0.56	+4.8
3,310,740	+		Sama_2770	0.56	-0.4
3,310,740	+		Sama_2770	0.56	-0.3
3,310,740	+		Sama_2770	0.56	+3.8
3,310,740	+		Sama_2770	0.56	-0.6
3,310,740	+		Sama_2770	0.56	+1.2
3,310,740	+		Sama_2770	0.56	-0.0
3,310,740	+		Sama_2770	0.56	+0.5
3,310,740	+		Sama_2770	0.56	+0.5
3,310,740	+		Sama_2770	0.56	+0.8
3,310,741	-		Sama_2770	0.56	-1.5
3,310,741	-		Sama_2770	0.56	-1.1
3,310,741	-		Sama_2770	0.56	-1.1
3,310,741	-		Sama_2770	0.56	-0.1
3,310,741	-		Sama_2770	0.56	-0.2
3,310,741	-		Sama_2770	0.56	-0.2
3,310,741	-		Sama_2770	0.56	-1.9
3,310,742	+		Sama_2770	0.56	-1.3
3,310,743	-		Sama_2770	0.56	-0.5
3,310,743	-		Sama_2770	0.56	-0.5
3,310,743	-		Sama_2770	0.56	-0.1
3,310,773	+		Sama_2770	0.63	-1.8
3,310,773	+		Sama_2770	0.63	+0.9
3,310,774	-		Sama_2770	0.63	-1.8
3,310,774	-		Sama_2770	0.63	-0.1
3,310,774	-		Sama_2770	0.63	+0.2
3,310,774	-		Sama_2770	0.63	+2.3
3,310,785	+		Sama_2770	0.66	-1.1
3,310,842	+		Sama_2770	0.78	-0.1
3,310,843	-		Sama_2770	0.78	+0.6
3,310,843	-		Sama_2770	0.78	-1.7
3,310,843	-		Sama_2770	0.78	-0.3
3,310,878	+		Sama_2770	0.86	-0.1
3,310,879	-		Sama_2770	0.86	-0.1
3,310,909	-				+1.8
3,310,909	-				+1.1
3,310,917	+				+1.9
3,310,917	+				-0.9
3,310,918	-				+3.1
3,310,955	+				-0.3
3,310,956	-				-0.5
3,310,959	+				-1.1
3,310,962	-				+1.5
3,311,049	+				-0.7
3,311,079	+				+1.2
3,311,079	+				-1.8
3,311,080	-				+0.9
3,311,080	-				-0.9
3,311,080	-				+0.6
3,311,080	-				-0.6
3,311,098	+				+0.7
3,311,179	+		Sama_2771	0.13	-0.8
3,311,179	+		Sama_2771	0.13	+1.0
3,311,179	+		Sama_2771	0.13	-0.0
3,311,179	+		Sama_2771	0.13	-3.0
3,311,180	-		Sama_2771	0.13	+0.8
3,311,180	-		Sama_2771	0.13	+0.2
3,311,180	-		Sama_2771	0.13	-0.7
3,311,180	-		Sama_2771	0.13	-0.8
3,311,239	+		Sama_2771	0.18	+0.1
3,311,240	-		Sama_2771	0.18	-0.5
3,311,266	+		Sama_2771	0.19	+2.3
3,311,266	+		Sama_2771	0.19	+0.9
3,311,266	+		Sama_2771	0.19	-0.3
3,311,266	+		Sama_2771	0.19	-0.8
3,311,267	-		Sama_2771	0.20	-0.5
3,311,267	-		Sama_2771	0.20	-0.6
3,311,267	-		Sama_2771	0.20	+2.9
3,311,372	-		Sama_2771	0.27	-0.4
3,311,380	+		Sama_2771	0.28	+0.1
3,311,381	-		Sama_2771	0.28	+0.7
3,311,386	+		Sama_2771	0.28	+2.5
3,311,386	+		Sama_2771	0.28	+1.3
3,311,386	+		Sama_2771	0.28	-0.1
3,311,386	+		Sama_2771	0.28	+1.8
3,311,386	+		Sama_2771	0.28	-1.7
3,311,387	-		Sama_2771	0.28	-2.8
3,311,387	-		Sama_2771	0.28	-0.1
3,311,388	+		Sama_2771	0.28	+0.0
3,311,389	-		Sama_2771	0.28	+0.1
3,311,389	-		Sama_2771	0.28	-1.9
3,311,389	-		Sama_2771	0.28	+0.1
3,311,389	-		Sama_2771	0.28	-2.1
3,311,455	+		Sama_2771	0.33	+0.6
3,311,455	+		Sama_2771	0.33	+0.1
3,311,470	-		Sama_2771	0.34	-1.1
3,311,488	+		Sama_2771	0.35	+0.1
3,311,488	+		Sama_2771	0.35	-1.1
3,311,488	+		Sama_2771	0.35	-0.8
3,311,489	-		Sama_2771	0.35	-1.1
3,311,489	-		Sama_2771	0.35	+1.2
3,311,491	+		Sama_2771	0.36	-1.4
3,311,552	+		Sama_2771	0.40	+0.7
3,311,731	+		Sama_2771	0.53	+2.0
3,311,752	+		Sama_2771	0.54	-2.9
3,311,752	+		Sama_2771	0.54	-2.2
3,311,752	+		Sama_2771	0.54	+0.2
3,311,752	+		Sama_2771	0.54	+0.9
3,311,752	+		Sama_2771	0.54	-1.6
3,311,752	+		Sama_2771	0.54	+0.2
3,311,752	+		Sama_2771	0.54	+1.1
3,311,752	+		Sama_2771	0.54	+1.0
3,311,753	-		Sama_2771	0.54	-0.9
3,311,753	-		Sama_2771	0.54	+0.3
3,311,753	-		Sama_2771	0.54	-0.3
3,311,753	-		Sama_2771	0.54	+1.1
3,311,753	-		Sama_2771	0.54	+0.9
3,311,753	-		Sama_2771	0.54	-0.8
3,311,753	-		Sama_2771	0.54	+1.1
3,311,754	+		Sama_2771	0.54	-2.2
3,311,755	-		Sama_2771	0.55	+2.0
3,311,755	-		Sama_2771	0.55	+1.2
3,311,755	-		Sama_2771	0.55	-1.5
3,311,755	-		Sama_2771	0.55	-0.1
3,311,797	+		Sama_2771	0.58	-1.0
3,311,797	+		Sama_2771	0.58	+0.1
3,311,797	+		Sama_2771	0.58	+0.5
3,311,825	+		Sama_2771	0.60	+1.0
3,311,825	+		Sama_2771	0.60	-2.8
3,311,825	+		Sama_2771	0.60	+0.4
3,311,826	-		Sama_2771	0.60	+0.4
3,311,826	-		Sama_2771	0.60	+1.4
3,311,826	-		Sama_2771	0.60	+0.6
3,311,826	-		Sama_2771	0.60	+0.0
3,311,826	-		Sama_2771	0.60	+1.6
3,311,927	+		Sama_2771	0.67	-0.4
3,311,927	+		Sama_2771	0.67	+1.7
3,311,927	+		Sama_2771	0.67	+0.8
3,311,927	+		Sama_2771	0.67	-1.5
3,311,927	+		Sama_2771	0.67	-2.5
3,311,927	+		Sama_2771	0.67	+0.9
3,311,928	-		Sama_2771	0.67	-0.4
3,311,928	-		Sama_2771	0.67	-1.7
3,311,928	-		Sama_2771	0.67	+1.0
3,311,928	-		Sama_2771	0.67	-0.3
3,311,928	-		Sama_2771	0.67	-1.9
3,311,928	-		Sama_2771	0.67	-1.7
3,311,928	-		Sama_2771	0.67	+0.5
3,311,928	-		Sama_2771	0.67	+0.8
3,311,934	+		Sama_2771	0.67	+1.7
3,311,934	+		Sama_2771	0.67	+1.1
3,311,935	-		Sama_2771	0.67	+1.1
3,311,935	-		Sama_2771	0.67	+1.2
3,311,935	-		Sama_2771	0.67	-1.3
3,311,937	+		Sama_2771	0.68	-0.5
3,311,937	+		Sama_2771	0.68	+0.5
3,311,937	+		Sama_2771	0.68	+1.1
3,311,937	+		Sama_2771	0.68	-2.9
3,311,937	+		Sama_2771	0.68	+1.0
3,311,937	+		Sama_2771	0.68	+1.8
3,311,937	+		Sama_2771	0.68	+0.5
3,311,938	-		Sama_2771	0.68	+0.8
3,311,938	-		Sama_2771	0.68	-0.7
3,311,938	-		Sama_2771	0.68	-1.5
3,311,938	-		Sama_2771	0.68	-0.2
3,311,938	-		Sama_2771	0.68	-2.3
3,311,938	-		Sama_2771	0.68	-1.3
3,311,938	-		Sama_2771	0.68	+1.5
3,311,938	-		Sama_2771	0.68	-1.7