Strain Fitness in Shewanella amazonensis SB2B around Sama_2639

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,161,181	-		Sama_2638	0.35	+0.7
3,161,181	-		Sama_2638	0.35	-0.1
3,161,181	-		Sama_2638	0.35	+0.7
3,161,199	+		Sama_2638	0.37	+5.9
3,161,199	+		Sama_2638	0.37	-1.2
3,161,200	-		Sama_2638	0.37	-1.5
3,161,200	-		Sama_2638	0.37	+0.8
3,161,200	-		Sama_2638	0.37	+0.8
3,161,232	+		Sama_2638	0.39	+1.4
3,161,233	-		Sama_2638	0.39	+1.2
3,161,294	+		Sama_2638	0.44	-1.0
3,161,294	+		Sama_2638	0.44	+0.7
3,161,295	-		Sama_2638	0.44	-0.2
3,161,295	-		Sama_2638	0.44	+1.5
3,161,295	-		Sama_2638	0.44	-0.2
3,161,355	+		Sama_2638	0.49	+3.3
3,161,355	+		Sama_2638	0.49	-0.9
3,161,356	-		Sama_2638	0.49	-0.3
3,161,356	-		Sama_2638	0.49	+2.5
3,161,374	+		Sama_2638	0.50	-1.7
3,161,375	-		Sama_2638	0.50	+1.7
3,161,375	-		Sama_2638	0.50	-1.1
3,161,488	-		Sama_2638	0.59	-0.5
3,161,509	-		Sama_2638	0.61	+0.3
3,161,521	-		Sama_2638	0.62	-0.3
3,161,559	+		Sama_2638	0.65	-0.5
3,161,560	-		Sama_2638	0.65	-1.7
3,161,560	-		Sama_2638	0.65	+1.0
3,161,661	+		Sama_2638	0.73	-0.8
3,161,665	-		Sama_2638	0.73	-1.1
3,161,665	-		Sama_2638	0.73	+0.8
3,161,666	+		Sama_2638	0.73	-1.1
3,161,666	+		Sama_2638	0.73	-2.0
3,161,667	-		Sama_2638	0.73	-1.7
3,161,667	-		Sama_2638	0.73	+1.9
3,161,667	-		Sama_2638	0.73	+0.0
3,161,667	-		Sama_2638	0.73	+0.7
3,161,667	-		Sama_2638	0.73	-1.5
3,161,667	-		Sama_2638	0.73	-1.1
3,161,776	-		Sama_2638	0.82	+1.8
3,161,777	+		Sama_2638	0.82	-0.5
3,161,777	+		Sama_2638	0.82	-0.4
3,161,777	+		Sama_2638	0.82	-1.4
3,161,778	-		Sama_2638	0.82	-1.5
3,161,778	-		Sama_2638	0.82	+0.3
3,161,778	-		Sama_2638	0.82	+0.1
3,161,895	+				-1.5
3,161,896	-				+1.1
3,161,896	-				-1.9
3,161,908	+				+0.7
3,161,908	+				+0.6
3,161,909	-				+1.0
3,161,909	-				+1.5
3,161,909	-				+1.5
3,161,909	-				-1.1
3,161,910	+				-1.0
3,161,911	-				-0.9
3,161,911	-				-1.9
3,161,982	-				-0.5
3,161,982	-				+0.4
3,161,983	+				+2.5
3,161,984	+				-0.9
3,161,984	+				-1.1
3,161,984	+				-0.9
3,161,984	+				+1.3
3,161,984	+				-0.9
3,161,984	+				-0.9
3,161,984	+				-0.5
3,161,985	-				-0.5
3,161,985	-				+0.6
3,161,985	-				+0.9
3,161,985	-				-2.9
3,161,985	-				+1.5
3,161,994	+				-0.5
3,161,994	+				-3.0
3,162,003	+				+2.5
3,162,003	+				+1.0
3,162,003	+				-2.2
3,162,004	-				+1.9
3,162,062	+				-0.7
3,162,062	+				+0.1
3,162,062	+				-1.3
3,162,062	+				-1.1
3,162,062	+				+1.1
3,162,062	+				-1.5
3,162,063	-				+1.0
3,162,063	-				-1.1
3,162,063	-				-1.7
3,162,063	-				+0.5
3,162,085	+				+0.2
3,162,091	+				+1.8
3,162,091	+				+0.3
3,162,091	+				-1.7
3,162,092	-				-0.4
3,162,163	-				+0.1
3,162,163	-				+0.1
3,162,182	+				+1.5
3,162,182	+				-1.1
3,162,183	-				-1.1
3,162,227	+				-0.9
3,162,227	+				+1.3
3,162,285	+		Sama_2639	0.13	-0.7
3,162,298	+		Sama_2639	0.14	-0.9
3,162,298	+		Sama_2639	0.14	-1.7
3,162,299	-		Sama_2639	0.14	-2.0
3,162,299	-		Sama_2639	0.14	-1.5
3,162,299	-		Sama_2639	0.14	-1.0
3,162,325	+		Sama_2639	0.18	+0.8
3,162,325	+		Sama_2639	0.18	-1.9
3,162,325	+		Sama_2639	0.18	-0.2
3,162,325	+		Sama_2639	0.18	+2.1
3,162,325	+		Sama_2639	0.18	-0.9
3,162,325	+		Sama_2639	0.18	-1.2
3,162,326	-		Sama_2639	0.18	-1.3
3,162,490	-		Sama_2639	0.38	-2.0
3,162,551	+		Sama_2639	0.45	-2.5
3,162,552	-		Sama_2639	0.45	-1.5
3,162,552	-		Sama_2639	0.45	-1.0
3,162,595	-		Sama_2639	0.51	-1.5
3,162,595	-		Sama_2639	0.51	-1.2
3,162,663	+		Sama_2639	0.59	-0.2
3,162,679	-		Sama_2639	0.61	-0.0
3,162,694	+		Sama_2639	0.63	+1.5
3,162,695	-		Sama_2639	0.63	-2.9
3,162,763	-		Sama_2639	0.71	+0.5
3,162,857	+		Sama_2639	0.83	-1.9
3,162,858	-		Sama_2639	0.83	+1.2
3,162,941	+				-0.6
3,162,941	+				-1.1
3,162,941	+				+0.5
3,162,941	+				-1.6
3,163,024	+				-1.8
3,163,025	-				+0.0
3,163,025	-				-0.9
3,163,041	-				-0.3
3,163,049	+				+1.6
3,163,133	+		Sama_2640	0.15	-1.5
3,163,133	+		Sama_2640	0.15	+0.6
3,163,133	+		Sama_2640	0.15	+0.8
3,163,133	+		Sama_2640	0.15	-1.9
3,163,133	+		Sama_2640	0.15	+0.3
3,163,133	+		Sama_2640	0.15	-0.6
3,163,133	+		Sama_2640	0.15	-1.9
3,163,134	-		Sama_2640	0.15	+0.0
3,163,134	-		Sama_2640	0.15	-1.9
3,163,134	-		Sama_2640	0.15	-0.5
3,163,134	-		Sama_2640	0.15	+0.1
3,163,134	-		Sama_2640	0.15	-0.9
3,163,134	-		Sama_2640	0.15	+0.3
3,163,134	-		Sama_2640	0.15	-0.9
3,163,134	-		Sama_2640	0.15	+1.1
3,163,137	+		Sama_2640	0.16	-1.5
3,163,137	+		Sama_2640	0.16	-1.1
3,163,137	+		Sama_2640	0.16	+1.8
3,163,137	+		Sama_2640	0.16	+0.6
3,163,137	+		Sama_2640	0.16	-1.0
3,163,138	-		Sama_2640	0.16	+0.5
3,163,138	-		Sama_2640	0.16	-1.5
3,163,138	-		Sama_2640	0.16	+1.0
3,163,176	-		Sama_2640	0.20	-0.7
3,163,200	-		Sama_2640	0.23	-2.4
3,163,203	+		Sama_2640	0.23	+2.7
3,163,204	-		Sama_2640	0.23	-0.5
3,163,204	-		Sama_2640	0.23	+2.3
3,163,204	-		Sama_2640	0.23	-1.6
3,163,254	-		Sama_2640	0.29	-1.9
3,163,265	+		Sama_2640	0.30	+0.7
3,163,266	-		Sama_2640	0.30	-0.1
3,163,266	-		Sama_2640	0.30	-0.1
3,163,271	+		Sama_2640	0.30	-0.6
3,163,272	-		Sama_2640	0.31	-1.6
3,163,352	+		Sama_2640	0.39	-0.1
3,163,352	+		Sama_2640	0.39	-1.1
3,163,353	-		Sama_2640	0.39	-1.1
3,163,363	+		Sama_2640	0.41	-1.0
3,163,364	-		Sama_2640	0.41	+2.2
3,163,369	+		Sama_2640	0.41	-1.9
3,163,369	+		Sama_2640	0.41	+1.5
3,163,369	+		Sama_2640	0.41	-0.2
3,163,370	-		Sama_2640	0.41	-1.3
3,163,370	-		Sama_2640	0.41	+0.2
3,163,370	-		Sama_2640	0.41	-2.2
3,163,383	-		Sama_2640	0.43	-0.5
3,163,383	-		Sama_2640	0.43	-0.5
3,163,385	-		Sama_2640	0.43	-2.2
3,163,385	-		Sama_2640	0.43	-0.3
3,163,385	-		Sama_2640	0.43	-1.4
3,163,385	-		Sama_2640	0.43	-1.5
3,163,385	-		Sama_2640	0.43	+0.8
3,163,395	-		Sama_2640	0.44	-0.9
3,163,395	-		Sama_2640	0.44	-2.8
3,163,407	+		Sama_2640	0.45	-0.2
3,163,407	+		Sama_2640	0.45	-0.9
3,163,408	-		Sama_2640	0.46	-0.9
3,163,428	-		Sama_2640	0.48	-0.9
3,163,428	-		Sama_2640	0.48	-0.9
3,163,493	-		Sama_2640	0.55	+0.5
3,163,493	-		Sama_2640	0.55	+0.3
3,163,493	-		Sama_2640	0.55	-0.7
3,163,529	+		Sama_2640	0.59	+0.5
3,163,529	+		Sama_2640	0.59	+0.8
3,163,530	-		Sama_2640	0.59	+1.7
3,163,582	+		Sama_2640	0.65	+2.0
3,163,589	+		Sama_2640	0.65	-0.7
3,163,589	+		Sama_2640	0.65	-0.3
3,163,590	-		Sama_2640	0.65	+0.2
3,163,590	-		Sama_2640	0.65	-1.8
3,163,632	+		Sama_2640	0.70	+0.6
3,163,633	-		Sama_2640	0.70	-1.1
3,163,633	-		Sama_2640	0.70	+0.2
3,163,633	-		Sama_2640	0.70	-0.1
3,163,652	-		Sama_2640	0.72	+2.6
3,163,652	-		Sama_2640	0.72	-2.0
3,163,660	+		Sama_2640	0.73	+0.8
3,163,661	-		Sama_2640	0.73	-0.1
3,163,661	-		Sama_2640	0.73	-2.0
3,163,663	+		Sama_2640	0.73	-0.4
3,163,664	-		Sama_2640	0.74	-2.3
3,163,690	+		Sama_2640	0.76	+0.8
3,163,690	+		Sama_2640	0.76	+0.2
3,163,690	+		Sama_2640	0.76	-0.0
3,163,691	-		Sama_2640	0.77	-1.4
3,163,732	+		Sama_2640	0.81	+0.3
3,163,750	+		Sama_2640	0.83	+0.3
3,163,751	-		Sama_2640	0.83	-0.9
3,163,853	+				+0.2
3,163,913	+				-1.1
3,163,913	+				-0.1
3,163,914	-				+0.6
3,163,944	+				-0.9
3,163,944	+				+0.1
3,163,944	+				-1.3
3,163,944	+				+0.5
3,163,944	+				+1.1
3,163,945	-				-0.9
3,163,945	-				-0.1
3,163,945	-				-1.3