Strain Fitness in Shewanella amazonensis SB2B around Sama_2580

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,087,532	+				-0.6
3,087,533	-				-1.7
3,087,533	-				+0.4
3,087,533	-				-1.1
3,087,533	-				+1.8
3,087,533	-				-1.4
3,087,576	+				+0.3
3,087,576	+				+4.4
3,087,585	+				-0.6
3,087,585	+				+0.9
3,087,585	+				-1.3
3,087,585	+				+2.6
3,087,585	+				+0.7
3,087,586	-				-1.5
3,087,586	-				-1.1
3,087,603	+				-2.4
3,087,646	-				-1.5
3,087,646	-				-0.4
3,087,699	+				+2.0
3,087,699	+				-2.0
3,087,700	-				+1.1
3,087,706	+				+0.0
3,087,706	+				-0.7
3,087,706	+				-1.9
3,087,707	-				+1.3
3,087,712	+				-1.8
3,087,712	+				+0.2
3,087,712	+				-0.9
3,087,713	-				-0.9
3,087,716	+				-0.5
3,087,716	+				+0.1
3,087,716	+				-1.4
3,087,717	-				-0.3
3,087,717	-				+0.4
3,087,717	-				+0.4
3,087,717	-				+0.4
3,087,717	-				-2.5
3,087,722	+				+0.4
3,087,722	+				-1.4
3,087,722	+				-0.1
3,087,722	+				+0.4
3,087,722	+				-1.4
3,087,723	-				-1.4
3,087,723	-				+1.9
3,087,723	-				+1.5
3,087,795	-				-2.7
3,087,795	-				-0.9
3,087,795	-				+3.0
3,087,906	-		Sama_2580	0.13	+1.6
3,087,908	+		Sama_2580	0.13	+1.2
3,087,908	+		Sama_2580	0.13	-0.6
3,087,908	+		Sama_2580	0.13	-1.8
3,087,908	+		Sama_2580	0.13	+2.7
3,087,909	-		Sama_2580	0.13	-0.7
3,087,909	-		Sama_2580	0.13	-0.1
3,087,909	-		Sama_2580	0.13	+0.2
3,087,909	-		Sama_2580	0.13	+1.3
3,087,911	+		Sama_2580	0.13	+0.8
3,087,911	+		Sama_2580	0.13	+0.5
3,087,911	+		Sama_2580	0.13	+0.7
3,087,911	+		Sama_2580	0.13	+1.3
3,087,911	+		Sama_2580	0.13	+0.1
3,087,911	+		Sama_2580	0.13	-0.5
3,087,911	+		Sama_2580	0.13	+1.8
3,087,911	+		Sama_2580	0.13	+0.9
3,087,912	-		Sama_2580	0.13	-2.3
3,087,912	-		Sama_2580	0.13	+0.2
3,087,912	-		Sama_2580	0.13	-2.5
3,087,950	+		Sama_2580	0.17	-0.1
3,087,950	+		Sama_2580	0.17	+0.1
3,087,951	-		Sama_2580	0.17	+1.1
3,088,040	+		Sama_2580	0.24	+0.9
3,088,041	-		Sama_2580	0.24	+0.0
3,088,089	-		Sama_2580	0.28	+1.4
3,088,089	-		Sama_2580	0.28	+0.1
3,088,217	-		Sama_2580	0.38	+1.0
3,088,217	-		Sama_2580	0.38	-1.9
3,088,220	-		Sama_2580	0.38	-1.4
3,088,220	-		Sama_2580	0.38	+1.1
3,088,220	-		Sama_2580	0.38	-2.3
3,088,220	-		Sama_2580	0.38	-0.9
3,088,220	-		Sama_2580	0.38	-0.6
3,088,342	+		Sama_2580	0.48	+1.3
3,088,343	-		Sama_2580	0.48	-0.1
3,088,362	-		Sama_2580	0.50	-0.9
3,088,397	+		Sama_2580	0.52	-0.1
3,088,398	-		Sama_2580	0.53	+1.8
3,088,406	+		Sama_2580	0.53	+0.7
3,088,407	-		Sama_2580	0.53	+1.4
3,088,470	+		Sama_2580	0.58	+1.3
3,088,471	-		Sama_2580	0.58	-1.3
3,088,471	-		Sama_2580	0.58	+1.2
3,088,471	-		Sama_2580	0.58	+0.3
3,088,474	+		Sama_2580	0.59	-0.6
3,088,474	+		Sama_2580	0.59	-1.1
3,088,474	+		Sama_2580	0.59	+0.7
3,088,474	+		Sama_2580	0.59	+0.3
3,088,475	-		Sama_2580	0.59	+0.1
3,088,497	+		Sama_2580	0.61	-0.3
3,088,497	+		Sama_2580	0.61	+2.4
3,088,498	-		Sama_2580	0.61	+0.3
3,088,498	-		Sama_2580	0.61	-1.4
3,088,498	-		Sama_2580	0.61	+0.7
3,088,498	-		Sama_2580	0.61	-1.1
3,088,506	+		Sama_2580	0.61	+2.0
3,088,507	-		Sama_2580	0.61	+0.1
3,088,507	-		Sama_2580	0.61	-2.2
3,088,558	+		Sama_2580	0.65	+1.1
3,088,558	+		Sama_2580	0.65	+1.0
3,088,558	+		Sama_2580	0.65	+1.4
3,088,558	+		Sama_2580	0.65	+0.9
3,088,558	+		Sama_2580	0.65	+0.6
3,088,558	+		Sama_2580	0.65	+0.7
3,088,558	+		Sama_2580	0.65	+0.6
3,088,558	+		Sama_2580	0.65	-1.0
3,088,558	+		Sama_2580	0.65	+2.2
3,088,559	-		Sama_2580	0.66	+1.7
3,088,559	-		Sama_2580	0.66	-0.5
3,088,559	-		Sama_2580	0.66	+0.6
3,088,559	-		Sama_2580	0.66	-0.6
3,088,559	-		Sama_2580	0.66	-0.9
3,088,559	-		Sama_2580	0.66	-0.3
3,088,562	+		Sama_2580	0.66	-0.6
3,088,562	+		Sama_2580	0.66	-0.3
3,088,562	+		Sama_2580	0.66	-1.4
3,088,562	+		Sama_2580	0.66	+1.6
3,088,562	+		Sama_2580	0.66	-0.5
3,088,562	+		Sama_2580	0.66	-0.1
3,088,562	+		Sama_2580	0.66	+0.6
3,088,563	-		Sama_2580	0.66	+0.0
3,088,563	-		Sama_2580	0.66	-0.1
3,088,563	-		Sama_2580	0.66	+0.3
3,088,563	-		Sama_2580	0.66	+2.9
3,088,563	-		Sama_2580	0.66	+2.1
3,088,563	-		Sama_2580	0.66	-0.6
3,088,563	-		Sama_2580	0.66	+1.3
3,088,563	-		Sama_2580	0.66	-1.1
3,088,563	-		Sama_2580	0.66	+0.0
3,088,563	-		Sama_2580	0.66	-0.1
3,088,563	-		Sama_2580	0.66	+0.3
3,088,647	+		Sama_2580	0.73	+3.0
3,088,647	+		Sama_2580	0.73	-0.6
3,088,647	+		Sama_2580	0.73	+1.2
3,088,648	-		Sama_2580	0.73	+1.6
3,088,648	-		Sama_2580	0.73	+1.2
3,088,648	-		Sama_2580	0.73	+1.4
3,088,648	-		Sama_2580	0.73	-1.7
3,088,678	+		Sama_2580	0.75	+0.4
3,088,707	+		Sama_2580	0.77	-0.8
3,088,707	+		Sama_2580	0.77	-0.7
3,088,708	-		Sama_2580	0.78	-0.1
3,088,716	+		Sama_2580	0.78	-0.2
3,088,717	-		Sama_2580	0.78	+2.0
3,088,717	-		Sama_2580	0.78	-2.1
3,088,786	-		Sama_2580	0.84	-0.8
3,088,786	-		Sama_2580	0.84	+0.6
3,088,786	-		Sama_2580	0.84	-0.6
3,088,805	+		Sama_2580	0.85	-0.6
3,088,805	+		Sama_2580	0.85	-0.1
3,088,805	+		Sama_2580	0.85	+0.9
3,088,806	-		Sama_2580	0.85	-0.1
3,088,806	-		Sama_2580	0.85	+0.6
3,088,829	-		Sama_2580	0.87	+0.7
3,088,856	+		Sama_2580	0.89	-1.4
3,088,856	+		Sama_2580	0.89	-0.1
3,088,857	-		Sama_2580	0.90	+0.9
3,088,905	+				-0.3
3,088,996	-				-0.3
3,089,002	+				+0.9
3,089,002	+				-1.6
3,089,003	-				-0.4
3,089,003	-				-0.4
3,089,003	-				-1.1
3,089,144	-		Sama_2581	0.29	+0.1
3,089,206	-		Sama_2581	0.41	-0.7
3,089,246	+		Sama_2581	0.49	-0.6
3,089,247	-		Sama_2581	0.49	-1.9
3,089,247	-		Sama_2581	0.49	-2.0
3,089,290	-		Sama_2581	0.58	+0.9
3,089,302	-		Sama_2581	0.60	-0.7
3,089,426	+		Sama_2581	0.85	-1.6
3,089,467	+				-0.8
3,089,468	-				-0.3
3,089,478	+				+1.6
3,089,478	+				+1.6
3,089,479	-				-1.9
3,089,479	-				-0.3
3,089,479	-				+0.1