Strain Fitness in Shewanella amazonensis SB2B around Sama_1724

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
2,108,576	+		Sama_1723	0.58	+0.4
2,108,577	-		Sama_1723	0.58	-1.9
2,108,577	-		Sama_1723	0.58	-2.0
2,108,577	-		Sama_1723	0.58	+0.9
2,108,577	-		Sama_1723	0.58	+0.3
2,108,642	+		Sama_1723	0.62	-1.6
2,108,642	+		Sama_1723	0.62	-1.1
2,108,643	-		Sama_1723	0.62	+1.5
2,108,643	-		Sama_1723	0.62	-1.6
2,108,643	-		Sama_1723	0.62	-0.6
2,108,643	-		Sama_1723	0.62	+0.9
2,108,647	-		Sama_1723	0.62	-0.6
2,108,701	-		Sama_1723	0.65	-1.2
2,108,701	-		Sama_1723	0.65	+0.5
2,108,713	-		Sama_1723	0.66	+1.3
2,108,714	+		Sama_1723	0.66	-2.4
2,108,715	-		Sama_1723	0.66	+1.7
2,108,715	-		Sama_1723	0.66	-1.9
2,108,715	-		Sama_1723	0.66	-2.6
2,108,734	-		Sama_1723	0.67	-1.4
2,108,734	-		Sama_1723	0.67	-1.6
2,108,734	-		Sama_1723	0.67	-2.5
2,108,734	-		Sama_1723	0.67	+0.4
2,108,735	+		Sama_1723	0.67	-1.1
2,108,736	-		Sama_1723	0.67	-1.9
2,108,736	-		Sama_1723	0.67	-0.4
2,108,736	-		Sama_1723	0.67	-1.1
2,108,736	-		Sama_1723	0.67	+0.9
2,108,736	-		Sama_1723	0.67	-1.2
2,108,740	-		Sama_1723	0.67	-2.6
2,108,740	-		Sama_1723	0.67	+0.2
2,108,770	-		Sama_1723	0.69	-1.1
2,108,796	-		Sama_1723	0.70	-1.1
2,108,803	-		Sama_1723	0.70	-2.1
2,108,803	-		Sama_1723	0.70	-2.1
2,108,803	-		Sama_1723	0.70	-2.2
2,108,804	+		Sama_1723	0.70	-1.4
2,108,805	-		Sama_1723	0.70	+0.5
2,108,879	+		Sama_1723	0.74	-2.4
2,108,971	-		Sama_1723	0.79	-1.1
2,109,051	-		Sama_1723	0.84	-2.9
2,109,051	-		Sama_1723	0.84	+1.3
2,109,109	-		Sama_1723	0.87	-1.1
2,109,161	-		Sama_1723	0.90	-1.1
2,109,192	+				-1.9
2,109,215	-				-1.9
2,109,365	-				+0.2
2,109,380	+				-0.6
2,109,380	+				-2.1
2,109,380	+				+0.5
2,109,380	+				-2.5
2,109,380	+				+0.2
2,109,380	+				-1.9
2,109,381	-				-1.1
2,109,381	-				+0.1
2,109,420	+				+0.4
2,109,459	+				-2.1
2,109,459	+				-0.2
2,109,460	-				+0.9
2,109,461	+				-1.8
2,109,475	+				-2.6
2,109,476	-				+1.8
2,109,548	+				-0.6
2,109,575	+				-2.1
2,109,588	+				-0.4
2,109,588	+				+0.9
2,109,588	+				-1.4
2,109,588	+				+1.5
2,109,602	+				-1.1
2,109,677	+				-1.6
2,109,690	+				+1.8
2,109,691	-				-0.3
2,109,811	-		Sama_1724	0.15	+1.9
2,109,885	+		Sama_1724	0.18	-1.1
2,109,894	+		Sama_1724	0.19	+2.0
2,109,969	+		Sama_1724	0.23	+1.1
2,109,969	+		Sama_1724	0.23	-1.9
2,109,969	+		Sama_1724	0.23	+0.9
2,109,970	-		Sama_1724	0.23	-1.1
2,109,970	-		Sama_1724	0.23	-1.6
2,109,979	+		Sama_1724	0.23	+2.3
2,109,980	-		Sama_1724	0.23	+0.2
2,110,012	+		Sama_1724	0.25	+1.1
2,110,012	+		Sama_1724	0.25	-1.4
2,110,030	-		Sama_1724	0.26	-1.1
2,110,047	+		Sama_1724	0.26	+1.9
2,110,106	+		Sama_1724	0.29	+2.6
2,110,106	+		Sama_1724	0.29	-0.3
2,110,131	-		Sama_1724	0.31	-0.1
2,110,143	+		Sama_1724	0.31	+2.1
2,110,146	+		Sama_1724	0.31	+0.3
2,110,243	-		Sama_1724	0.36	-1.5
2,110,248	+		Sama_1724	0.36	+0.2
2,110,248	+		Sama_1724	0.36	+0.9
2,110,248	+		Sama_1724	0.36	+1.0
2,110,383	+		Sama_1724	0.43	+1.5
2,110,386	+		Sama_1724	0.43	-1.1
2,110,431	+		Sama_1724	0.45	+1.7
2,110,431	+		Sama_1724	0.45	+2.1
2,110,509	+		Sama_1724	0.49	-0.4
2,110,509	+		Sama_1724	0.49	+2.5
2,110,509	+		Sama_1724	0.49	+0.9
2,110,510	-		Sama_1724	0.49	+1.9
2,110,512	+		Sama_1724	0.50	-0.2
2,110,513	-		Sama_1724	0.50	+0.7
2,110,548	+		Sama_1724	0.51	+0.5
2,110,548	+		Sama_1724	0.51	+0.5
2,110,687	+		Sama_1724	0.58	-0.7
2,110,687	+		Sama_1724	0.58	-1.3
2,110,687	+		Sama_1724	0.58	+1.9
2,110,687	+		Sama_1724	0.58	+0.1
2,110,687	+		Sama_1724	0.58	-0.9
2,110,687	+		Sama_1724	0.58	+0.2
2,110,687	+		Sama_1724	0.58	+0.9
2,110,688	-		Sama_1724	0.58	+0.9
2,110,688	-		Sama_1724	0.58	-1.6
2,110,708	-		Sama_1724	0.59	-0.6
2,110,805	-		Sama_1724	0.64	-0.2
2,110,842	-		Sama_1724	0.66	-1.4
2,110,849	-		Sama_1724	0.66	+0.9
2,110,898	+		Sama_1724	0.69	+1.1
2,110,898	+		Sama_1724	0.69	+1.1
2,110,931	+		Sama_1724	0.70	+1.4
2,110,969	+		Sama_1724	0.72	+2.3
2,110,970	-		Sama_1724	0.72	+3.1
2,111,000	+		Sama_1724	0.74	+0.8
2,111,000	+		Sama_1724	0.74	-0.4
2,111,046	+		Sama_1724	0.76	-2.6
2,111,056	+		Sama_1724	0.76	+1.6
2,111,056	+		Sama_1724	0.76	-0.3
2,111,079	+		Sama_1724	0.78	+0.2
2,111,117	+		Sama_1724	0.80	-0.8
2,111,128	+		Sama_1724	0.80	-0.6
2,111,128	+		Sama_1724	0.80	-0.4
2,111,185	+		Sama_1724	0.83	-0.4
2,111,185	+		Sama_1724	0.83	+0.5
2,111,185	+		Sama_1724	0.83	+1.5
2,111,299	+		Sama_1724	0.89	+0.7
2,111,325	-		Sama_1724	0.90	-1.4
2,111,325	-		Sama_1724	0.90	+0.2
2,111,325	-		Sama_1724	0.90	-0.1
2,111,328	+				-1.1
2,111,328	+				+0.4
2,111,328	+				+1.7
2,111,328	+				-1.6
2,111,328	+				-3.0
2,111,328	+				-0.8
2,111,328	+				+1.3
2,111,329	-				-0.1
2,111,329	-				+0.5
2,111,375	+				-0.3
2,111,376	-				-1.1
2,111,433	+				+0.4
2,111,434	-				+0.9
2,111,527	+				-1.9
2,111,527	+				+0.9
2,111,545	+				-1.4
2,111,575	+				+0.5
2,111,599	+				+0.5
2,111,599	+				-1.6
2,111,602	-				+0.2
2,111,605	+				+0.9
2,111,605	+				-0.2
2,111,605	+				-1.8
2,111,605	+				-0.4
2,111,605	+				-1.1
2,111,605	+				-1.9
2,111,606	-				+3.1
2,111,614	+				-1.4
2,111,614	+				-2.1
2,111,618	+				+0.4
2,111,663	+				-1.9
2,111,664	-				-0.6
2,111,668	-				+0.4
2,111,668	-				-0.9
2,111,680	+				-0.4
2,111,692	+				-1.9
2,111,701	-				+0.9
2,111,725	+				-0.8
2,111,726	-				+0.9
2,111,729	+				-0.7
2,111,729	+				+1.9
2,111,729	+				-0.5
2,111,729	+				-1.1
2,111,729	+				+0.9
2,111,730	-				+0.2
2,111,730	-				-0.4
2,111,730	-				+0.9
2,111,730	-				+1.9
2,111,730	-				+1.1
2,111,730	-				-3.0
2,111,730	-				+0.5
2,111,730	-				-1.6
2,111,730	-				-0.5
2,111,730	-				-1.4
2,111,730	-				-1.6
2,111,730	-				-0.1
2,111,737	+				-1.8
2,111,738	-				-2.4
2,111,738	-				-1.3
2,111,761	+				-2.1
2,111,805	+		Sama_1725	0.14	+1.1
2,111,806	-		Sama_1725	0.14	+1.3
2,111,827	+		Sama_1725	0.18	-1.1
2,111,835	-		Sama_1725	0.20	-0.8
2,111,857	+		Sama_1725	0.24	+2.1
2,111,918	+		Sama_1725	0.36	+0.3
2,111,918	+		Sama_1725	0.36	+3.3
2,111,918	+		Sama_1725	0.36	+0.9
2,111,919	-		Sama_1725	0.36	-1.3
2,111,928	+		Sama_1725	0.38	-0.1
2,111,928	+		Sama_1725	0.38	+0.9
2,111,929	-		Sama_1725	0.38	-0.1
2,111,958	-		Sama_1725	0.43	+2.9
2,112,090	+		Sama_1725	0.69	+0.5
2,112,131	+		Sama_1725	0.76	-0.5
2,112,344	-		Sama_1726	0.25	-0.6
2,112,412	-		Sama_1726	0.44	-1.9
2,112,437	-		Sama_1726	0.51	-2.9
2,112,437	-		Sama_1726	0.51	-2.9
2,112,437	-		Sama_1726	0.51	-2.8