Strain Fitness in Shewanella amazonensis SB2B around Sama_1591

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
1,937,189	-		Sama_1590	0.14	-0.1
1,937,189	-		Sama_1590	0.14	+1.2
1,937,316	-		Sama_1590	0.26	-1.0
1,937,316	-		Sama_1590	0.26	+1.4
1,937,332	-		Sama_1590	0.28	+0.4
1,937,335	-		Sama_1590	0.28	+0.1
1,937,335	-		Sama_1590	0.28	+1.9
1,937,335	-		Sama_1590	0.28	-0.8
1,937,340	+		Sama_1590	0.29	+2.0
1,937,403	+		Sama_1590	0.35	+1.4
1,937,403	+		Sama_1590	0.35	-2.7
1,937,404	-		Sama_1590	0.35	-0.0
1,937,404	-		Sama_1590	0.35	+1.5
1,937,452	+		Sama_1590	0.40	-0.1
1,937,469	+		Sama_1590	0.41	+1.0
1,937,470	-		Sama_1590	0.42	+0.1
1,937,484	+		Sama_1590	0.43	+0.9
1,937,517	-		Sama_1590	0.46	+2.0
1,937,539	+		Sama_1590	0.48	+1.5
1,937,553	+		Sama_1590	0.50	-2.3
1,937,553	+		Sama_1590	0.50	+2.1
1,937,553	+		Sama_1590	0.50	+3.6
1,937,575	+		Sama_1590	0.52	+2.5
1,937,575	+		Sama_1590	0.52	+1.6
1,937,575	+		Sama_1590	0.52	+0.5
1,937,575	+		Sama_1590	0.52	+0.7
1,937,575	+		Sama_1590	0.52	+2.3
1,937,575	+		Sama_1590	0.52	+2.1
1,937,675	+		Sama_1590	0.62	+1.6
1,937,676	-		Sama_1590	0.62	+0.3
1,937,676	-		Sama_1590	0.62	+1.1
1,937,701	-		Sama_1590	0.64	+2.3
1,937,720	-		Sama_1590	0.66	+0.3
1,937,720	-		Sama_1590	0.66	+2.8
1,937,764	+		Sama_1590	0.71	+3.7
1,937,764	+		Sama_1590	0.71	+1.2
1,937,764	+		Sama_1590	0.71	+0.3
1,937,764	+		Sama_1590	0.71	+1.0
1,937,874	+		Sama_1590	0.82	-1.2
1,937,875	-		Sama_1590	0.82	+1.6
1,937,875	-		Sama_1590	0.82	+1.5
1,937,887	+		Sama_1590	0.83	+1.8
1,937,887	+		Sama_1590	0.83	+2.0
1,937,888	-		Sama_1590	0.83	-0.3
1,937,920	-		Sama_1590	0.86	-0.6
1,937,946	-		Sama_1590	0.89	+0.8
1,938,058	+				-2.9
1,938,058	+				-0.1
1,938,071	+				+1.0
1,938,074	-				-0.1
1,938,074	-				+3.7
1,938,092	+				-0.9
1,938,092	+				+0.3
1,938,093	-				+2.8
1,938,093	-				+0.6
1,938,093	-				+1.0
1,938,093	-				+2.5
1,938,171	+				-0.0
1,938,171	+				+2.1
1,938,172	-				+0.7
1,938,257	+				-0.7
1,938,257	+				+1.8
1,938,257	+				+1.7
1,938,258	-				+4.2
1,938,258	-				+1.0
1,938,258	-				-0.0
1,938,269	+				+1.0
1,938,269	+				+1.2
1,938,270	-				-1.7
1,938,340	+		Sama_1591	0.10	+2.3
1,938,340	+		Sama_1591	0.10	+0.6
1,938,341	-		Sama_1591	0.11	+2.5
1,938,341	-		Sama_1591	0.11	+0.4
1,938,462	+		Sama_1591	0.16	-0.2
1,938,463	-		Sama_1591	0.16	+2.1
1,938,507	-		Sama_1591	0.18	-0.2
1,938,590	+		Sama_1591	0.21	+0.3
1,938,591	-		Sama_1591	0.21	+3.7
1,938,698	-		Sama_1591	0.26	+1.3
1,938,701	+		Sama_1591	0.26	+1.7
1,938,701	+		Sama_1591	0.26	+0.6
1,938,780	+		Sama_1591	0.30	-0.0
1,938,780	+		Sama_1591	0.30	+1.8
1,938,781	-		Sama_1591	0.30	+2.6
1,938,867	+		Sama_1591	0.33	-0.0
1,938,915	+		Sama_1591	0.35	+1.2
1,938,916	-		Sama_1591	0.35	-1.6
1,939,118	-		Sama_1591	0.44	+3.1
1,939,395	+		Sama_1591	0.56	+3.0
1,939,396	-		Sama_1591	0.56	+1.7
1,939,396	-		Sama_1591	0.56	+1.8
1,939,443	-		Sama_1591	0.58	-0.2
1,939,466	-		Sama_1591	0.59	+0.1
1,939,476	+		Sama_1591	0.60	+4.6
1,939,483	+		Sama_1591	0.60	+2.1
1,939,483	+		Sama_1591	0.60	+2.8
1,939,484	-		Sama_1591	0.60	+2.5
1,939,484	-		Sama_1591	0.60	+2.6
1,939,517	+		Sama_1591	0.62	+2.6
1,939,531	+		Sama_1591	0.62	-0.0
1,939,531	+		Sama_1591	0.62	-1.0
1,939,531	+		Sama_1591	0.62	-1.0
1,939,532	-		Sama_1591	0.62	+1.4
1,939,535	+		Sama_1591	0.62	+1.0
1,939,535	+		Sama_1591	0.62	+1.6
1,939,536	-		Sama_1591	0.62	+1.5
1,939,536	-		Sama_1591	0.62	+2.3
1,939,585	+		Sama_1591	0.64	-0.6
1,939,585	+		Sama_1591	0.64	+3.2
1,939,585	+		Sama_1591	0.64	+3.1
1,939,769	+		Sama_1591	0.72	+4.1
1,939,769	+		Sama_1591	0.72	-0.1
1,939,769	+		Sama_1591	0.72	-2.5
1,939,769	+		Sama_1591	0.72	+0.2
1,939,770	-		Sama_1591	0.72	-0.3
1,939,780	+		Sama_1591	0.73	+3.3
1,939,781	-		Sama_1591	0.73	+1.9
1,939,781	-		Sama_1591	0.73	+1.0
1,939,824	+		Sama_1591	0.75	-1.2
1,939,824	+		Sama_1591	0.75	+2.6
1,939,825	-		Sama_1591	0.75	+1.4
1,939,946	+		Sama_1591	0.80	+1.2
1,939,947	-		Sama_1591	0.80	-1.3
1,939,952	+		Sama_1591	0.80	+1.0
1,939,953	-		Sama_1591	0.80	+2.0
1,940,005	+		Sama_1591	0.83	+1.1
1,940,027	+		Sama_1591	0.84	+0.1
1,940,027	+		Sama_1591	0.84	+2.1
1,940,028	-		Sama_1591	0.84	-2.5
1,940,028	-		Sama_1591	0.84	-0.0
1,940,028	-		Sama_1591	0.84	+1.0
1,940,073	+		Sama_1591	0.86	-0.3
1,940,073	+		Sama_1591	0.86	-0.4
1,940,073	+		Sama_1591	0.86	-0.6
1,940,074	-		Sama_1591	0.86	+0.4
1,940,074	-		Sama_1591	0.86	+1.3
1,940,119	+		Sama_1591	0.88	+3.0
1,940,121	+		Sama_1591	0.88	+1.5
1,940,121	+		Sama_1591	0.88	+0.8
1,940,121	+		Sama_1591	0.88	-0.0
1,940,121	+		Sama_1591	0.88	-0.6
1,940,122	-		Sama_1591	0.88	+2.1
1,940,122	-		Sama_1591	0.88	+1.8
1,940,122	-		Sama_1591	0.88	+3.0
1,940,122	-		Sama_1591	0.88	+2.3
1,940,133	-		Sama_1591	0.88	+0.1
1,940,133	-		Sama_1591	0.88	+3.0
1,940,133	-		Sama_1591	0.88	-1.1
1,940,137	+		Sama_1591	0.88	+1.0
1,940,137	+		Sama_1591	0.88	-1.6
1,940,138	-		Sama_1591	0.88	+1.7
1,940,141	+		Sama_1591	0.89	+2.6
1,940,141	+		Sama_1591	0.89	-1.8
1,940,142	-		Sama_1591	0.89	+2.0
1,940,144	-		Sama_1591	0.89	+0.4
1,940,187	+				+2.0
1,940,187	+				+1.1
1,940,187	+				+1.3
1,940,198	+				+0.4
1,940,199	-				+1.3
1,940,199	-				+4.8
1,940,211	+				+1.5
1,940,211	+				+2.0
1,940,211	+				-0.7
1,940,269	+				-2.3
1,940,290	+				+1.0
1,940,290	+				+2.0
1,940,290	+				+1.0
1,940,290	+				+1.9
1,940,291	-				+1.2
1,940,326	+				+1.1
1,940,341	+				+1.0
1,940,341	+				+0.9
1,940,341	+				+1.4
1,940,342	-				-1.6
1,940,359	+				-0.6
1,940,457	+				-1.3
1,940,457	+				+0.3
1,940,457	+				+2.5
1,940,462	-				-1.5
1,940,462	-				-0.7
1,940,514	-				-2.5
1,940,534	-				-1.8
1,940,534	-				-0.6
1,940,534	-				-1.7
1,940,567	+				-1.4
1,940,573	+				-0.6
1,940,619	+				-0.0
1,940,724	+				-0.0
1,940,795	+				-0.2
1,940,859	+				-1.0
1,941,043	+				+0.7
1,941,043	+				+1.3
1,941,043	+				-2.3
1,941,043	+				+1.0
1,941,043	+				-1.0
1,941,043	+				-1.8
1,941,229	-		Sama_1592	0.11	+1.6
1,941,229	-		Sama_1592	0.11	+4.5