Strain Fitness in Shewanella amazonensis SB2B around Sama_1447

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
1,756,142	+				-1.4
1,756,142	+				+0.0
1,756,142	+				+1.0
1,756,178	+				-0.9
1,756,179	-				-1.3
1,756,212	+				+0.0
1,756,213	-				+0.0
1,756,215	+				-1.1
1,756,216	-				+0.0
1,756,292	+				-2.5
1,756,300	+				-0.2
1,756,300	+				+0.5
1,756,300	+				-0.4
1,756,300	+				-2.2
1,756,300	+				-2.4
1,756,301	-				-0.4
1,756,301	-				-1.0
1,756,304	+				-1.0
1,756,305	-				-0.5
1,756,305	-				+1.3
1,756,305	-				-1.0
1,756,311	+				-0.1
1,756,312	-				-0.7
1,756,312	-				+0.3
1,756,315	+				+1.7
1,756,315	+				+0.4
1,756,325	+				-1.3
1,756,334	+				-0.8
1,756,406	+				+0.4
1,756,417	+				-2.5
1,756,417	+				-2.1
1,756,417	+				+0.8
1,756,420	+				-1.3
1,756,420	+				+2.2
1,756,420	+				-1.0
1,756,435	+				+0.5
1,756,435	+				+0.7
1,756,529	+		Sama_1446	0.19	+1.9
1,756,582	+		Sama_1446	0.28	+1.0
1,756,599	+		Sama_1446	0.30	+1.7
1,756,600	-		Sama_1446	0.30	-1.1
1,756,616	+		Sama_1446	0.33	+1.2
1,756,629	+		Sama_1446	0.35	+0.4
1,756,629	+		Sama_1446	0.35	-3.0
1,756,640	+		Sama_1446	0.37	+0.9
1,756,640	+		Sama_1446	0.37	-0.5
1,756,714	+		Sama_1446	0.48	-0.5
1,756,798	+		Sama_1446	0.62	+3.0
1,756,798	+		Sama_1446	0.62	+1.1
1,756,798	+		Sama_1446	0.62	-0.0
1,756,953	+		Sama_1446	0.86	-1.8
1,757,180	-				+0.0
1,757,268	+				-1.8
1,757,268	+				+1.5
1,757,269	-				-0.5
1,757,275	+				-1.0
1,757,276	-				+0.9
1,757,328	-		Sama_1447	0.11	-0.8
1,757,532	-		Sama_1447	0.23	+0.5
1,757,532	-		Sama_1447	0.23	-0.2
1,757,686	+		Sama_1447	0.32	+0.0
1,757,686	+		Sama_1447	0.32	-1.0
1,757,687	-		Sama_1447	0.32	-0.3
1,757,721	+		Sama_1447	0.34	-0.4
1,757,722	-		Sama_1447	0.34	-1.3
1,757,751	+		Sama_1447	0.35	-1.0
1,757,751	+		Sama_1447	0.35	-0.2
1,757,752	-		Sama_1447	0.35	+1.8
1,757,752	-		Sama_1447	0.35	+1.0
1,757,756	+		Sama_1447	0.36	+1.2
1,757,756	+		Sama_1447	0.36	+1.8
1,757,756	+		Sama_1447	0.36	+0.3
1,757,756	+		Sama_1447	0.36	+0.4
1,757,756	+		Sama_1447	0.36	-1.8
1,757,756	+		Sama_1447	0.36	+0.0
1,757,757	-		Sama_1447	0.36	-2.0
1,757,757	-		Sama_1447	0.36	-1.5
1,757,757	-		Sama_1447	0.36	+0.5
1,757,757	-		Sama_1447	0.36	-1.5
1,757,790	+		Sama_1447	0.38	+0.8
1,757,791	-		Sama_1447	0.38	+2.0
1,757,856	+		Sama_1447	0.41	-1.0
1,757,857	-		Sama_1447	0.41	-1.5
1,757,857	-		Sama_1447	0.41	+1.4
1,757,857	-		Sama_1447	0.41	+1.4
1,757,940	+		Sama_1447	0.46	+0.0
1,757,940	+		Sama_1447	0.46	+0.4
1,757,940	+		Sama_1447	0.46	-2.1
1,757,940	+		Sama_1447	0.46	-1.3
1,757,940	+		Sama_1447	0.46	-1.5
1,757,941	-		Sama_1447	0.46	+0.7
1,757,941	-		Sama_1447	0.46	+0.2
1,757,941	-		Sama_1447	0.46	+0.4
1,757,943	+		Sama_1447	0.46	+0.5
1,757,943	+		Sama_1447	0.46	+0.0
1,757,943	+		Sama_1447	0.46	-3.0
1,757,943	+		Sama_1447	0.46	-0.8
1,757,944	-		Sama_1447	0.46	+0.0
1,757,944	-		Sama_1447	0.46	+1.0
1,757,944	-		Sama_1447	0.46	+0.1
1,757,944	-		Sama_1447	0.46	+0.7
1,757,961	+		Sama_1447	0.47	+0.0
1,757,962	-		Sama_1447	0.47	-1.3
1,757,962	-		Sama_1447	0.47	+2.0
1,757,982	+		Sama_1447	0.49	+0.1
1,757,982	+		Sama_1447	0.49	-3.1
1,758,054	+		Sama_1447	0.53	-1.0
1,758,054	+		Sama_1447	0.53	+1.3
1,758,055	-		Sama_1447	0.53	-3.0
1,758,055	-		Sama_1447	0.53	+0.7
1,758,078	+		Sama_1447	0.54	-2.0
1,758,078	+		Sama_1447	0.54	+2.8
1,758,078	+		Sama_1447	0.54	-0.4
1,758,078	+		Sama_1447	0.54	+0.9
1,758,078	+		Sama_1447	0.54	+0.6
1,758,078	+		Sama_1447	0.54	+0.8
1,758,079	-		Sama_1447	0.54	+0.2
1,758,079	-		Sama_1447	0.54	+2.8
1,758,079	-		Sama_1447	0.54	+1.6
1,758,079	-		Sama_1447	0.54	+0.6
1,758,191	+		Sama_1447	0.60	-1.2
1,758,202	+		Sama_1447	0.61	-2.3
1,758,202	+		Sama_1447	0.61	+0.7
1,758,202	+		Sama_1447	0.61	+2.2
1,758,203	-		Sama_1447	0.61	-0.3
1,758,210	+		Sama_1447	0.61	-1.2
1,758,211	-		Sama_1447	0.62	-0.1
1,758,211	-		Sama_1447	0.62	-0.2
1,758,211	-		Sama_1447	0.62	+0.7
1,758,245	+		Sama_1447	0.63	+0.2
1,758,245	+		Sama_1447	0.63	-1.8
1,758,246	-		Sama_1447	0.63	+0.0
1,758,246	-		Sama_1447	0.63	+0.3
1,758,246	-		Sama_1447	0.63	-0.7
1,758,246	-		Sama_1447	0.63	-0.3
1,758,269	+		Sama_1447	0.65	-1.5
1,758,293	-		Sama_1447	0.66	+0.6
1,758,321	-		Sama_1447	0.68	+0.2
1,758,321	-		Sama_1447	0.68	+2.8
1,758,321	-		Sama_1447	0.68	+1.3
1,758,321	-		Sama_1447	0.68	+1.0
1,758,392	-		Sama_1447	0.72	-1.3
1,758,587	-		Sama_1447	0.83	+5.8
1,758,624	+		Sama_1447	0.85	+1.6
1,758,624	+		Sama_1447	0.85	-2.5
1,758,633	+		Sama_1447	0.85	+0.3
1,758,633	+		Sama_1447	0.85	+1.8
1,758,634	-		Sama_1447	0.85	+0.8
1,758,713	-				+0.1
1,758,766	+				-2.7
1,758,766	+				-0.2
1,758,766	+				+1.0
1,758,767	-				-1.5
1,758,767	-				-0.8
1,758,767	-				+0.6
1,758,767	-				-1.3
1,758,768	+				-0.3
1,758,768	+				-0.7
1,758,768	+				-0.2
1,758,769	-				-1.5
1,758,769	-				+0.0
1,758,769	-				+0.4
1,758,769	-				+0.5
1,758,879	+				+1.3
1,758,880	-				+0.0
1,758,889	+				-0.1
1,758,889	+				+0.0
1,758,909	+				-0.3
1,758,990	-				-2.4
1,758,994	+				-0.5
1,758,994	+				-3.4
1,758,994	+				-1.2
1,758,995	-				+1.3
1,758,995	-				+2.0
1,759,064	+				+1.6
1,759,064	+				+1.2
1,759,065	-				-0.6
1,759,106	-				-0.5
1,759,137	+		Sama_1448	0.17	-3.4
1,759,138	-		Sama_1448	0.17	-3.0
1,759,138	-		Sama_1448	0.17	-2.7
1,759,138	-		Sama_1448	0.17	-2.0
1,759,201	+		Sama_1448	0.35	+0.5
1,759,217	+		Sama_1448	0.40	-1.3
1,759,217	+		Sama_1448	0.40	-1.9
1,759,217	+		Sama_1448	0.40	-1.3
1,759,268	+		Sama_1448	0.54	-3.0
1,759,274	+		Sama_1448	0.56	-0.5
1,759,274	+		Sama_1448	0.56	+0.5
1,759,274	+		Sama_1448	0.56	-4.0
1,759,274	+		Sama_1448	0.56	-1.5
1,759,368	+		Sama_1448	0.82	-1.0
1,759,369	-		Sama_1448	0.82	+0.0
1,759,369	-		Sama_1448	0.82	-0.7
1,759,441	+				+1.0
1,759,441	+				-2.9
1,759,525	+				-1.3
1,759,557	+		Sama_1449	0.12	+0.0
1,759,557	+		Sama_1449	0.12	+1.2
1,759,558	-		Sama_1449	0.12	-2.1
1,759,575	-		Sama_1449	0.13	-0.5
1,759,575	-		Sama_1449	0.13	-1.0
1,759,577	-		Sama_1449	0.14	-1.0
1,759,577	-		Sama_1449	0.14	-1.8
1,759,733	+		Sama_1449	0.29	-1.4
1,759,733	+		Sama_1449	0.29	+2.6
1,759,733	+		Sama_1449	0.29	+0.2
1,759,734	-		Sama_1449	0.29	-1.5
1,759,734	-		Sama_1449	0.29	+1.8
1,759,734	-		Sama_1449	0.29	+1.6
1,759,734	-		Sama_1449	0.29	+1.6
1,759,735	+		Sama_1449	0.30	+0.0
1,759,735	+		Sama_1449	0.30	+0.3
1,759,735	+		Sama_1449	0.30	+0.7
1,759,735	+		Sama_1449	0.30	+0.2
1,759,735	+		Sama_1449	0.30	+1.5
1,759,819	+		Sama_1449	0.38	+1.0
1,759,827	-		Sama_1449	0.39	-1.2
1,759,839	+		Sama_1449	0.40	-1.5
1,759,839	+		Sama_1449	0.40	+0.2
1,759,839	+		Sama_1449	0.40	-0.5
1,759,839	+		Sama_1449	0.40	+0.7
1,759,839	+		Sama_1449	0.40	-1.5
1,759,839	+		Sama_1449	0.40	+0.9
1,759,839	+		Sama_1449	0.40	+1.4
1,759,840	-		Sama_1449	0.40	+1.0
1,759,840	-		Sama_1449	0.40	+1.5
1,759,840	-		Sama_1449	0.40	-0.5
1,759,840	-		Sama_1449	0.40	-1.0
1,759,840	-		Sama_1449	0.40	-0.8
1,759,840	-		Sama_1449	0.40	+1.9
1,759,840	-		Sama_1449	0.40	-1.8