Strain Fitness in Shewanella loihica PV-4 around Shew_3367

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
4,015,656	+		Shew_3366	0.73	+1.0
4,015,658	+		Shew_3366	0.73	-0.7
4,015,664	-		Shew_3366	0.73	-1.0
4,015,664	-		Shew_3366	0.73	+0.2
4,015,911	+		Shew_3366	0.81	+1.2
4,016,428	-				+0.6
4,016,704	-				+1.3
4,016,726	+		Shew_3367	0.11	+0.3
4,016,734	-		Shew_3367	0.12	+0.6
4,016,820	-		Shew_3367	0.20	+0.5
4,016,839	+		Shew_3367	0.22	+0.7
4,017,305	+		Shew_3367	0.66	+0.0
4,017,342	+		Shew_3367	0.70	+0.1
4,017,414	-		Shew_3367	0.77	+0.2
4,017,442	+		Shew_3367	0.79	+0.1
4,017,514	-		Shew_3367	0.86	-0.3
4,017,694	+				+0.2
4,017,745	-		Shew_3368	0.11	-0.1
4,017,805	-		Shew_3368	0.23	+0.1
4,017,850	+		Shew_3368	0.31	-0.5
4,017,859	-		Shew_3368	0.33	-0.0
4,018,042	-		Shew_3368	0.67	-0.5
4,018,042	-		Shew_3368	0.67	+0.1
4,018,044	+		Shew_3368	0.68	+0.5
4,018,052	-		Shew_3368	0.69	+0.4
4,018,124	+		Shew_3368	0.83	-0.4
4,018,188	-				+0.3
4,018,326	-				-0.0
4,018,341	-				+0.5
4,018,362	-		Shew_3369	0.16	-0.2