Strain Fitness in Shewanella loihica PV-4 around Shew_3176

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,780,422	-		Shew_3175	0.58	-0.4
3,780,436	-		Shew_3175	0.59	+0.1
3,780,436	-		Shew_3175	0.59	-0.0
3,780,541	-		Shew_3175	0.67	+0.6
3,780,755	+		Shew_3175	0.84	+1.3
3,781,026	-				+0.2
3,781,139	-				+0.1
3,781,265	+				-0.5
3,781,423	-		Shew_3176	0.14	+1.9
3,782,132	+				+0.3
3,782,207	+		Shew_3177	0.20	-1.0
3,782,272	-		Shew_3177	0.33	+1.3
3,782,272	-		Shew_3177	0.33	+0.6
3,782,577	+				-2.6