Strain Fitness in Shewanella loihica PV-4 around Shew_3118

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,701,891	+				-0.1
3,701,925	+				-3.1
3,702,462	+		Shew_3117	0.79	-1.3
3,702,933	+				-2.9
3,702,969	+		Shew_3118	0.10	-3.8
3,703,107	+		Shew_3118	0.14	-2.1
3,703,107	+		Shew_3118	0.14	-0.3
3,703,115	-		Shew_3118	0.14	-2.2
3,703,138	+		Shew_3118	0.15	-1.9
3,703,771	+		Shew_3118	0.32	-1.1
3,703,825	+		Shew_3118	0.33	-1.5
3,703,833	-		Shew_3118	0.34	-2.5
3,703,850	-		Shew_3118	0.34	-2.0
3,704,051	-		Shew_3118	0.40	-2.7
3,704,162	-		Shew_3118	0.43	-2.4
3,704,172	+		Shew_3118	0.43	-2.4
3,704,180	-		Shew_3118	0.43	-2.1
3,704,180	-		Shew_3118	0.43	-1.2
3,704,391	+		Shew_3118	0.49	-3.2
3,704,557	-		Shew_3118	0.53	-3.1
3,704,641	+		Shew_3118	0.56	-2.8
3,704,751	+		Shew_3118	0.59	-3.4
3,704,891	-		Shew_3118	0.62	-1.7
3,705,016	-		Shew_3118	0.66	-1.9
3,705,067	+		Shew_3118	0.67	-2.5
3,705,288	+		Shew_3118	0.73	-1.0
3,705,550	-		Shew_3118	0.80	-2.0
3,705,588	+		Shew_3118	0.81	-2.8
3,705,615	+		Shew_3118	0.82	-2.3
3,705,749	+		Shew_3118	0.86	-1.9
3,705,791	-		Shew_3118	0.87	-4.4
3,706,151	+				-2.6
3,706,190	-				-1.1
3,706,478	-				-0.8
3,706,684	+				+0.1
3,706,709	+				+0.6
3,707,119	-		Shew_3119	0.59	-0.1