Strain Fitness in Shewanella loihica PV-4 around Shew_3112

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,692,387	-		Shew_3111	0.50	-0.1
3,692,387	-		Shew_3111	0.50	-0.2
3,692,437	+		Shew_3111	0.56	+0.5
3,692,437	+		Shew_3111	0.56	+0.2
3,692,437	+		Shew_3111	0.56	+0.3
3,692,437	+		Shew_3111	0.56	-0.7
3,692,445	-		Shew_3111	0.57	-0.3
3,692,445	-		Shew_3111	0.57	+0.2
3,692,445	-		Shew_3111	0.57	+0.2
3,692,445	-		Shew_3111	0.57	+0.0
3,692,656	-		Shew_3111	0.82	-0.1
3,692,907	+				-0.3
3,692,952	+				+0.6
3,692,960	-				+0.3
3,693,060	+				-0.3
3,693,076	-				-0.8
3,693,077	-				-0.1
3,693,125	+				+0.7
3,693,311	+				-0.0
3,693,363	+				+0.0
3,693,893	-		Shew_3112	0.35	+1.9
3,694,058	+		Shew_3112	0.45	-2.8
3,694,070	+		Shew_3112	0.45	-0.4
3,694,070	+		Shew_3112	0.45	+1.1
3,694,077	+		Shew_3112	0.46	-0.3
3,694,097	-		Shew_3112	0.47	+0.9
3,694,104	+		Shew_3112	0.47	+1.0
3,694,104	+		Shew_3112	0.47	+0.5
3,694,112	-		Shew_3112	0.48	+0.4
3,694,112	-		Shew_3112	0.48	+0.5
3,694,295	+		Shew_3112	0.58	+0.3
3,694,646	-		Shew_3112	0.77	+0.1
3,694,871	-		Shew_3112	0.90	+0.0
3,695,084	-				+0.9
3,695,134	+				-0.0
3,695,159	-				-0.2
3,695,161	+				+1.6
3,695,169	-				-0.3
3,695,406	+				-0.4
3,695,424	-				+0.4
3,695,769	+		Shew_3113	0.16	+0.7
3,695,769	+		Shew_3113	0.16	+0.2
3,695,769	+		Shew_3113	0.16	-1.4
3,695,777	-		Shew_3113	0.17	+0.5
3,695,777	-		Shew_3113	0.17	-0.4