Strain Fitness in Shewanella loihica PV-4 around Shew_2579

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,038,637	+				+0.5
3,038,722	+				-1.1
3,038,730	-		Shew_2578	0.10	-1.0
3,038,866	+		Shew_2578	0.27	-2.9
3,038,866	+		Shew_2578	0.27	+1.2
3,038,904	+		Shew_2578	0.32	+0.2
3,039,215	-		Shew_2578	0.71	+2.4
3,039,522	-				-0.6
3,039,761	-		Shew_2579	0.22	+0.2
3,039,836	+		Shew_2579	0.35	+1.3
3,039,839	-		Shew_2579	0.36	+0.4
3,040,154	-				+0.1
3,040,288	+				+0.8
3,040,331	+				-0.1
3,040,354	+				+2.3
3,040,357	-				+1.2
3,040,390	-				-1.1
3,040,390	-				-0.2
3,040,722	+				+0.1
3,041,036	-				-0.9