Strain Fitness in Shewanella loihica PV-4 around Shew_2426

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
2,850,495	-	fadJ	Shew_2425	0.55	-2.3
2,850,597	-	fadJ	Shew_2425	0.60	-0.9
2,850,790	-	fadJ	Shew_2425	0.69	-2.9
2,851,278	-				-0.3
2,851,587	-	fadI	Shew_2426	0.10	-2.4
2,851,723	-	fadI	Shew_2426	0.21	+0.2
2,851,982	+	fadI	Shew_2426	0.40	+0.7
2,852,494	-	fadI	Shew_2426	0.79	-0.7
2,852,827	+				+0.3
2,852,872	-				-0.4
2,853,398	-		Shew_2427	0.24	+1.1
2,853,646	+		Shew_2427	0.49	+1.8
2,853,752	-		Shew_2427	0.61	+0.6