Strain Fitness in Shewanella loihica PV-4 around Shew_2229

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
2,604,481	-		Shew_2228	0.51	+0.6
2,604,571	-		Shew_2228	0.58	+0.0
2,604,731	-		Shew_2228	0.70	-0.4
2,604,836	-		Shew_2228	0.78	+0.6
2,604,868	+		Shew_2228	0.81	+1.0
2,605,122	-				-0.7
2,605,180	-				+1.1
2,605,180	-				+1.2
2,605,189	-				+0.7
2,605,221	-				-0.4
2,605,578	-		Shew_2229	0.26	-4.9
2,606,363	-				+1.7