Strain Fitness in Shewanella loihica PV-4 around Shew_2125

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
2,462,716	+		Shew_2125	0.19	+1.0
2,463,028	+		Shew_2125	0.35	+0.3
2,463,060	+		Shew_2125	0.37	+1.3
2,463,236	+		Shew_2125	0.46	+1.2
2,463,244	-		Shew_2125	0.46	+1.5
2,463,423	+		Shew_2125	0.56	+1.7
2,463,803	-		Shew_2125	0.75	-1.0
2,463,847	-		Shew_2125	0.77	+1.4
2,464,043	-		Shew_2125	0.88	+2.4
2,464,111	+				+2.0
2,464,111	+				+3.1
2,464,119	-				+0.9
2,464,124	-				+1.9
2,464,774	-		Shew_2126	0.16	+0.3
2,464,884	+		Shew_2126	0.28	+0.3
2,464,985	-		Shew_2126	0.39	+0.6