Strain Fitness in Shewanella loihica PV-4 around Shew_1861

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
2,139,227	+				+0.1
2,139,448	+		Shew_1860	0.18	+0.6
2,139,450	-		Shew_1860	0.18	+1.3
2,139,712	+		Shew_1860	0.50	+1.3
2,139,886	-		Shew_1860	0.71	+0.3
2,139,902	-		Shew_1860	0.73	+1.0
2,140,028	-		Shew_1860	0.88	-0.0
2,140,275	-		Shew_1861	0.18	-1.1
2,140,276	-		Shew_1861	0.18	-0.5
2,140,620	+		Shew_1861	0.64	-2.9
2,140,628	-		Shew_1861	0.65	-0.5
2,140,628	-		Shew_1861	0.65	-1.7
2,140,628	-		Shew_1861	0.65	-2.5