Strain Fitness in Shewanella loihica PV-4 around Shew_1352

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
1,559,289	+	flgG	Shew_1350	0.77	-0.4
1,559,413	+				-0.6
1,560,280	+				-0.1
1,560,534	-	flgI	Shew_1352	0.31	+0.7
1,560,599	+	flgI	Shew_1352	0.37	+1.3
1,560,656	-	flgI	Shew_1352	0.42	+0.7
1,560,656	-	flgI	Shew_1352	0.42	+0.8
1,561,077	-	flgI	Shew_1352	0.81	+1.0
1,561,077	-	flgI	Shew_1352	0.81	+1.5
1,561,446	+	flgJ	Shew_1353	0.11	+0.9
1,561,928	+	flgJ	Shew_1353	0.58	+1.2
1,562,229	-	flgJ	Shew_1353	0.87	+0.7