Strain Fitness in Shewanella loihica PV-4 around Shew_1322

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
1,534,682	+		Shew_1321	0.23	+0.1
1,534,682	+		Shew_1321	0.23	-0.1
1,534,764	+		Shew_1321	0.30	+0.6
1,535,002	+		Shew_1321	0.50	-0.4
1,535,045	+		Shew_1321	0.53	+1.7
1,535,120	-		Shew_1321	0.60	+0.1
1,535,134	-		Shew_1321	0.61	-1.1
1,535,385	-		Shew_1321	0.82	-0.5
1,535,443	+		Shew_1321	0.87	-3.1
1,535,603	-				-1.5
1,535,710	+		Shew_1322	0.14	+0.9
1,535,872	-		Shew_1322	0.36	+1.2
1,535,872	-		Shew_1322	0.36	+1.1
1,535,884	-		Shew_1322	0.38	+1.9
1,535,994	+		Shew_1322	0.53	+2.3
1,535,994	+		Shew_1322	0.53	+1.1
1,535,997	-		Shew_1322	0.53	+1.1
1,536,002	-		Shew_1322	0.54	+1.3
1,536,217	+		Shew_1322	0.83	+0.2
1,536,248	+		Shew_1322	0.88	+2.9
1,536,444	-				+1.1
1,536,651	-		Shew_1323	0.27	+1.1
1,537,015	-		Shew_1323	0.59	+0.8