Strain Fitness in Shewanella loihica PV-4 around Shew_0306

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
329,254	-				+0.2
329,395	+		Shew_0306	0.11	-0.5
329,395	+		Shew_0306	0.11	-0.2
329,395	+		Shew_0306	0.11	-0.2
329,395	+		Shew_0306	0.11	-2.1
329,395	+		Shew_0306	0.11	+0.1
329,403	-		Shew_0306	0.11	+0.6
329,430	+		Shew_0306	0.12	+0.2
329,430	+		Shew_0306	0.12	-0.6
329,438	-		Shew_0306	0.12	+1.8
329,438	-		Shew_0306	0.12	-0.6
329,438	-		Shew_0306	0.12	-0.1
329,438	-		Shew_0306	0.12	+0.9
329,548	-		Shew_0306	0.16	-0.1
329,625	+		Shew_0306	0.19	-1.4
329,674	-		Shew_0306	0.21	+0.1
329,674	-		Shew_0306	0.21	+0.3
329,948	+		Shew_0306	0.31	-0.8
330,369	+		Shew_0306	0.47	-0.4
330,536	-		Shew_0306	0.54	-0.2
330,536	-		Shew_0306	0.54	+0.8
330,650	-		Shew_0306	0.58	-0.3
330,749	+		Shew_0306	0.62	+0.1
330,772	-		Shew_0306	0.63	+0.6
330,935	+		Shew_0306	0.69	+0.1
331,026	-		Shew_0306	0.72	-0.5
331,080	+		Shew_0306	0.74	-0.2
331,084	-		Shew_0306	0.74	+0.4
331,094	-		Shew_0306	0.75	-1.3
331,099	-		Shew_0306	0.75	+0.9
331,164	-		Shew_0306	0.77	+0.4
331,176	+		Shew_0306	0.78	+0.0
331,407	-		Shew_0306	0.86	+0.6
331,484	-		Shew_0306	0.89	-0.3
331,986	+				-1.4