Strain Fitness in Shewanella loihica PV-4 around Shew_0030

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
31,272	-				-0.7
31,658	+		Shew_0029	0.61	-1.1
31,658	+		Shew_0029	0.61	+0.2
31,658	+		Shew_0029	0.61	-0.3
31,658	+		Shew_0029	0.61	+0.1
31,666	-		Shew_0029	0.62	+0.0
31,893	+				-0.0
31,908	-				-0.4
31,936	-				-0.1
32,142	-				+0.7
32,285	+		Shew_0030	0.28	-0.1
32,293	-		Shew_0030	0.29	-0.3
32,293	-		Shew_0030	0.29	+0.1
32,336	-		Shew_0030	0.34	+0.3
32,585	+		Shew_0030	0.67	-0.3
32,604	+		Shew_0030	0.70	-0.5
32,815	-				-0.1
32,815	-				+0.2
32,862	-				+0.3
33,122	+				-3.9
33,148	+				-5.8
33,374	-		Shew_0031	0.10	-2.6
33,426	+		Shew_0031	0.15	-4.3
33,432	+		Shew_0031	0.15	-4.7
33,526	-		Shew_0031	0.23	-5.7
33,559	+		Shew_0031	0.26	-3.4
33,588	-		Shew_0031	0.29	-4.9
33,618	+		Shew_0031	0.31	-6.7
33,626	-		Shew_0031	0.32	-3.9
33,626	-		Shew_0031	0.32	-4.5