Strain Fitness in Shewanella oneidensis MR-1 around SO3195

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
3,335,693	+				-0.6
3,335,708	-				-0.6
3,335,734	+				-0.1
3,335,734	+				-0.0
3,335,734	+				-0.7
3,335,734	+				+0.3
3,335,742	-				+0.0
3,335,742	-				+0.3
3,335,742	-				+0.3
3,335,750	+				-0.3
3,335,779	-				-0.2
3,335,831	+		SO3194.1	0.12	-0.2
3,335,865	+		SO3194.1	0.16	+0.8
3,335,865	+		SO3194.1	0.16	-0.1
3,335,865	+		SO3194.1	0.16	+0.0
3,335,865	+		SO3194.1	0.16	-0.7
3,335,865	+		SO3194.1	0.16	+0.2
3,335,865	+		SO3194.1	0.16	+0.7
3,335,865	+		SO3194.1	0.16	-0.1
3,335,873	-		SO3194.1	0.17	-0.2
3,335,873	-		SO3194.1	0.17	+0.2
3,335,873	-		SO3194.1	0.17	-0.3
3,335,873	-		SO3194.1	0.17	-2.3
3,335,874	-		SO3194.1	0.17	-0.1
3,335,879	-		SO3194.1	0.17	-0.5
3,335,924	-		SO3194.1	0.22	-0.9
3,335,975	+		SO3194.1	0.27	+0.0
3,335,983	-		SO3194.1	0.28	+0.1
3,335,983	-		SO3194.1	0.28	-0.8
3,336,010	+		SO3194.1	0.31	-1.9
3,336,130	+		SO3194.1	0.43	+0.3
3,336,130	+		SO3194.1	0.43	-0.2
3,336,315	+		SO3194.1	0.62	-0.2
3,336,315	+		SO3194.1	0.62	+0.2
3,336,315	+		SO3194.1	0.62	-0.6
3,336,400	-		SO3194.1	0.71	-0.6
3,336,487	+		SO3194.1	0.79	-0.5
3,336,546	-		SO3194.1	0.86	+0.0
3,336,590	+				-0.0
3,336,735	+				+0.1
3,336,743	-		SO3195	0.11	-2.1
3,337,085	+		SO3195	0.76	-0.5
3,337,280	-				-0.5
3,337,568	-				+0.3
3,337,674	-		SO3196	0.13	+0.8
3,337,725	-		SO3196	0.18	-0.1
3,337,735	-		SO3196	0.19	+0.5
3,337,735	-		SO3196	0.19	+0.3
3,337,781	-		SO3196	0.23	-0.0
3,337,861	-		SO3196	0.30	+0.1
3,337,920	-		SO3196	0.35	+1.1
3,337,977	+		SO3196	0.40	-0.9
3,337,977	+		SO3196	0.40	+1.6
3,337,977	+		SO3196	0.40	-0.8
3,337,977	+		SO3196	0.40	+0.9
3,337,977	+		SO3196	0.40	-0.1
3,337,985	-		SO3196	0.41	+0.2
3,338,010	-		SO3196	0.43	+0.4
3,338,010	-		SO3196	0.43	-0.2
3,338,010	-		SO3196	0.43	-0.6
3,338,010	-		SO3196	0.43	+0.3
3,338,010	-		SO3196	0.43	-1.2
3,338,083	+		SO3196	0.50	+1.0
3,338,207	+		SO3196	0.61	-2.0