Strain Fitness in Shewanella oneidensis MR-1 around SO4292

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
4,470,067	+				+0.0
4,470,067	+				-0.9
4,470,067	+				-1.0
4,470,075	-				-0.1
4,470,075	-				-0.5
4,470,075	-				+0.7
4,470,075	-				+0.5
4,470,075	-				+0.4
4,470,075	-				-0.5
4,470,088	+				+0.3
4,470,112	+				-0.1
4,470,117	+				-0.4
4,470,125	-				-0.6
4,470,132	+				-0.2
4,470,132	+				+0.3
4,470,168	-				-0.5
4,470,169	-				-0.1
4,470,174	+				+0.1
4,470,179	-				+0.8
4,470,191	-	pstC	SO4291	0.11	+0.0
4,470,191	-	pstC	SO4291	0.11	+0.4
4,470,199	-	pstC	SO4291	0.12	-0.3
4,470,279	+	pstC	SO4291	0.21	-0.3
4,470,285	+	pstC	SO4291	0.22	-0.5
4,470,304	-	pstC	SO4291	0.24	+0.2
4,470,410	+	pstC	SO4291	0.36	+1.2
4,470,418	-	pstC	SO4291	0.37	-0.4
4,470,419	-	pstC	SO4291	0.37	+0.4
4,470,423	-	pstC	SO4291	0.38	+0.7
4,470,526	+	pstC	SO4291	0.49	+0.1
4,470,573	+	pstC	SO4291	0.55	+0.2
4,470,594	+	pstC	SO4291	0.57	+0.2
4,470,602	-	pstC	SO4291	0.58	+0.4
4,470,603	+	pstC	SO4291	0.58	-0.1
4,470,618	-	pstC	SO4291	0.60	+0.3
4,470,618	-	pstC	SO4291	0.60	-0.7
4,470,625	+	pstC	SO4291	0.61	+0.1
4,470,631	+	pstC	SO4291	0.61	+0.3
4,470,639	-	pstC	SO4291	0.62	+0.0
4,470,649	-	pstC	SO4291	0.63	-0.1
4,470,649	-	pstC	SO4291	0.63	+0.6
4,470,654	+	pstC	SO4291	0.64	-1.3
4,470,740	-	pstC	SO4291	0.74	+0.2
4,470,770	+	pstC	SO4291	0.77	+0.2
4,470,780	+	pstC	SO4291	0.78	-0.2
4,470,780	+	pstC	SO4291	0.78	+0.5
4,470,780	+	pstC	SO4291	0.78	-0.5
4,470,780	+	pstC	SO4291	0.78	-0.1
4,470,785	+	pstC	SO4291	0.79	-0.3
4,470,788	-	pstC	SO4291	0.79	-0.1
4,470,791	+	pstC	SO4291	0.80	-0.0
4,470,793	-	pstC	SO4291	0.80	+0.7
4,470,794	-	pstC	SO4291	0.80	+0.6
4,470,811	+	pstC	SO4291	0.82	+0.2
4,470,811	+	pstC	SO4291	0.82	+0.2
4,470,811	+	pstC	SO4291	0.82	+0.0
4,470,812	+	pstC	SO4291	0.82	+1.2
4,470,812	+	pstC	SO4291	0.82	-0.3
4,470,812	+	pstC	SO4291	0.82	+0.8
4,470,812	+	pstC	SO4291	0.82	+0.2
4,470,812	+	pstC	SO4291	0.82	-0.1
4,470,820	-	pstC	SO4291	0.83	+0.4
4,470,820	-	pstC	SO4291	0.83	+0.3
4,470,820	-	pstC	SO4291	0.83	-0.9
4,470,820	-	pstC	SO4291	0.83	-0.0
4,470,870	-	pstC	SO4291	0.89	+0.1
4,470,892	+				+0.3
4,470,900	-				+0.2
4,470,900	-				-0.6
4,470,900	-				-1.0
4,470,935	-				+0.6
4,470,988	-				+0.5
4,471,014	-				+0.4
4,471,020	+				-0.3
4,471,020	+				-0.2
4,471,020	+				+0.5
4,471,020	+				+0.4
4,471,020	+				+0.0
4,471,020	+				-0.0
4,471,020	+				-1.2
4,471,020	+				+0.2
4,471,020	+				-1.0
4,471,025	+				+1.1
4,471,028	-				+0.2
4,471,028	-				+0.4
4,471,028	-				-0.2
4,471,028	-				-0.1
4,471,028	-				+0.0
4,471,028	-				-0.5
4,471,028	-				-1.1
4,471,028	-				-0.2
4,471,060	+				+0.3
4,471,060	+				+0.4
4,471,060	+				-1.1
4,471,061	+				-0.4
4,471,061	+				+0.0
4,471,061	+				-0.5
4,471,061	+				+0.4
4,471,061	+				+0.4
4,471,061	+				+0.7
4,471,061	+				-1.1
4,471,067	+				+0.6
4,471,067	+				-0.1
4,471,067	+				+0.4
4,471,067	+				+0.0
4,471,067	+				-0.0
4,471,067	+				+0.5
4,471,067	+				-0.2
4,471,067	+				-1.8
4,471,067	+				+0.1
4,471,068	-				+0.3
4,471,068	-				+1.2
4,471,069	-				-0.1
4,471,069	-				-0.7
4,471,069	-				+0.6
4,471,069	-				+0.0
4,471,069	-				-0.3
4,471,069	-				-0.0
4,471,069	-				-0.3
4,471,069	-				-0.0
4,471,075	-				-0.3
4,471,075	-				-0.0
4,471,075	-				-0.0
4,471,075	-				-0.3
4,471,075	-				-0.1
4,471,075	-				-0.0
4,471,075	-				+0.5
4,471,075	-				+0.5
4,471,075	-				-0.0
4,471,075	-				-0.2
4,471,077	+				+0.2
4,471,080	+				+0.0
4,471,085	+				+0.3
4,471,085	+				+0.7
4,471,085	+				+0.4
4,471,085	+				-1.3
4,471,085	+				-0.7
4,471,085	-				-0.3
4,471,093	-				-0.1
4,471,148	-	pstS	SO4292	0.12	-0.3
4,471,189	-	pstS	SO4292	0.17	+0.1
4,471,194	-	pstS	SO4292	0.18	+0.9
4,471,199	+	pstS	SO4292	0.19	+0.3
4,471,199	+	pstS	SO4292	0.19	-0.4
4,471,199	+	pstS	SO4292	0.19	-0.1
4,471,199	+	pstS	SO4292	0.19	+1.0
4,471,207	-	pstS	SO4292	0.20	+0.1
4,471,207	-	pstS	SO4292	0.20	+1.2
4,471,207	-	pstS	SO4292	0.20	-0.4
4,471,207	-	pstS	SO4292	0.20	+0.5
4,471,207	-	pstS	SO4292	0.20	+0.6
4,471,213	+	pstS	SO4292	0.20	+0.8
4,471,221	-	pstS	SO4292	0.21	-0.3
4,471,221	-	pstS	SO4292	0.21	-0.3
4,471,221	-	pstS	SO4292	0.21	+0.1
4,471,245	+	pstS	SO4292	0.24	-0.1
4,471,247	+	pstS	SO4292	0.24	+0.2
4,471,247	+	pstS	SO4292	0.24	+0.4
4,471,253	-	pstS	SO4292	0.25	-2.2
4,471,259	+	pstS	SO4292	0.26	+0.4
4,471,259	+	pstS	SO4292	0.26	+0.1
4,471,267	+	pstS	SO4292	0.27	+0.3
4,471,268	+	pstS	SO4292	0.27	-0.5
4,471,268	+	pstS	SO4292	0.27	+0.5
4,471,268	+	pstS	SO4292	0.27	-0.4
4,471,268	+	pstS	SO4292	0.27	+0.4
4,471,269	+	pstS	SO4292	0.27	+0.4
4,471,275	+	pstS	SO4292	0.28	+0.1
4,471,276	-	pstS	SO4292	0.28	+0.2
4,471,276	-	pstS	SO4292	0.28	-0.3
4,471,276	-	pstS	SO4292	0.28	-0.1
4,471,276	-	pstS	SO4292	0.28	+0.2
4,471,277	-	pstS	SO4292	0.28	+0.3
4,471,281	+	pstS	SO4292	0.29	+0.2
4,471,281	+	pstS	SO4292	0.29	-0.0
4,471,281	+	pstS	SO4292	0.29	+0.1
4,471,281	+	pstS	SO4292	0.29	-0.8
4,471,281	+	pstS	SO4292	0.29	-0.1
4,471,282	-	pstS	SO4292	0.29	+0.6
4,471,289	-	pstS	SO4292	0.30	+0.3
4,471,289	-	pstS	SO4292	0.30	+0.4
4,471,289	-	pstS	SO4292	0.30	+0.8
4,471,289	-	pstS	SO4292	0.30	+0.2
4,471,289	-	pstS	SO4292	0.30	+0.3
4,471,289	-	pstS	SO4292	0.30	-0.6
4,471,289	-	pstS	SO4292	0.30	+0.7
4,471,289	-	pstS	SO4292	0.30	+0.6
4,471,289	-	pstS	SO4292	0.30	+0.7
4,471,289	-	pstS	SO4292	0.30	-1.0
4,471,289	-	pstS	SO4292	0.30	-0.5
4,471,304	+	pstS	SO4292	0.31	+0.6
4,471,304	+	pstS	SO4292	0.31	-0.5
4,471,305	+	pstS	SO4292	0.32	-0.2
4,471,305	+	pstS	SO4292	0.32	+0.0
4,471,305	+	pstS	SO4292	0.32	+0.1
4,471,312	-	pstS	SO4292	0.32	-0.0
4,471,313	-	pstS	SO4292	0.33	+0.4
4,471,313	-	pstS	SO4292	0.33	+0.4
4,471,313	-	pstS	SO4292	0.33	-0.0
4,471,313	-	pstS	SO4292	0.33	+0.4
4,471,317	+	pstS	SO4292	0.33	-0.9
4,471,333	+	pstS	SO4292	0.35	+0.2
4,471,338	+	pstS	SO4292	0.36	+1.0
4,471,343	+	pstS	SO4292	0.36	+0.6
4,471,345	-	pstS	SO4292	0.37	-0.1
4,471,410	+	pstS	SO4292	0.45	+0.1
4,471,410	+	pstS	SO4292	0.45	+0.2
4,471,417	-	pstS	SO4292	0.45	+0.4
4,471,418	+	pstS	SO4292	0.46	-0.1
4,471,418	+	pstS	SO4292	0.46	+0.8
4,471,419	+	pstS	SO4292	0.46	+0.9
4,471,426	-	pstS	SO4292	0.47	-0.7
4,471,426	-	pstS	SO4292	0.47	+0.1
4,471,426	-	pstS	SO4292	0.47	+0.5
4,471,426	-	pstS	SO4292	0.47	-0.5
4,471,427	+	pstS	SO4292	0.47	+0.5
4,471,429	+	pstS	SO4292	0.47	-0.2
4,471,429	+	pstS	SO4292	0.47	+0.8
4,471,429	+	pstS	SO4292	0.47	-0.5
4,471,429	+	pstS	SO4292	0.47	+0.1
4,471,429	+	pstS	SO4292	0.47	-0.7
4,471,435	-	pstS	SO4292	0.48	+0.8
4,471,435	-	pstS	SO4292	0.48	+0.2
4,471,435	-	pstS	SO4292	0.48	-0.4
4,471,437	-	pstS	SO4292	0.48	+0.7
4,471,457	+	pstS	SO4292	0.50	+0.4
4,471,463	+	pstS	SO4292	0.51	-0.4
4,471,471	-	pstS	SO4292	0.52	+0.2
4,471,471	-	pstS	SO4292	0.52	+0.6
4,471,472	-	pstS	SO4292	0.52	-0.6
4,471,529	+	pstS	SO4292	0.59	+0.5
4,471,529	+	pstS	SO4292	0.59	+0.4
4,471,529	+	pstS	SO4292	0.59	+0.3
4,471,534	+	pstS	SO4292	0.60	+0.1
4,471,537	-	pstS	SO4292	0.60	+0.9
4,471,537	-	pstS	SO4292	0.60	-0.3
4,471,539	+	pstS	SO4292	0.60	+0.1
4,471,542	-	pstS	SO4292	0.61	-1.1
4,471,542	-	pstS	SO4292	0.61	+0.1
4,471,542	-	pstS	SO4292	0.61	+0.2
4,471,545	+	pstS	SO4292	0.61	+0.8
4,471,548	-	pstS	SO4292	0.62	+0.3
4,471,550	+	pstS	SO4292	0.62	-0.3
4,471,550	+	pstS	SO4292	0.62	-0.3
4,471,550	+	pstS	SO4292	0.62	+0.6
4,471,550	+	pstS	SO4292	0.62	+0.6
4,471,550	+	pstS	SO4292	0.62	-0.5
4,471,550	+	pstS	SO4292	0.62	+1.4
4,471,550	+	pstS	SO4292	0.62	+0.4
4,471,553	-	pstS	SO4292	0.62	+0.1
4,471,553	-	pstS	SO4292	0.62	+0.1
4,471,555	+	pstS	SO4292	0.62	+0.6
4,471,555	+	pstS	SO4292	0.62	+0.0
4,471,558	-	pstS	SO4292	0.63	+0.4
4,471,558	-	pstS	SO4292	0.63	-0.8
4,471,568	+	pstS	SO4292	0.64	+0.7
4,471,574	-	pstS	SO4292	0.65	+0.0
4,471,585	+	pstS	SO4292	0.66	-0.2
4,471,585	+	pstS	SO4292	0.66	+0.0
4,471,593	-	pstS	SO4292	0.67	-0.5
4,471,593	-	pstS	SO4292	0.67	-0.3
4,471,637	+	pstS	SO4292	0.73	+0.4
4,471,687	+	pstS	SO4292	0.79	+0.7
4,471,687	+	pstS	SO4292	0.79	-0.4
4,471,687	+	pstS	SO4292	0.79	+0.6
4,471,694	+	pstS	SO4292	0.80	+0.7
4,471,694	+	pstS	SO4292	0.80	+0.2
4,471,694	+	pstS	SO4292	0.80	+0.1
4,471,702	-	pstS	SO4292	0.81	+0.1
4,471,702	-	pstS	SO4292	0.81	+1.0
4,471,747	+	pstS	SO4292	0.86	+0.5
4,471,747	+	pstS	SO4292	0.86	+0.0
4,471,747	+	pstS	SO4292	0.86	+1.0
4,471,747	+	pstS	SO4292	0.86	-0.3
4,471,747	+	pstS	SO4292	0.86	+0.5
4,471,747	+	pstS	SO4292	0.86	-0.2
4,471,747	+	pstS	SO4292	0.86	+0.1
4,471,747	+	pstS	SO4292	0.86	+0.4
4,471,749	+	pstS	SO4292	0.86	-0.4
4,471,749	+	pstS	SO4292	0.86	-0.1
4,471,749	+	pstS	SO4292	0.86	+0.6
4,471,755	-	pstS	SO4292	0.87	-0.4
4,471,755	-	pstS	SO4292	0.87	-0.1
4,471,755	-	pstS	SO4292	0.87	-0.5
4,471,755	-	pstS	SO4292	0.87	-0.1
4,471,755	-	pstS	SO4292	0.87	+0.5
4,471,757	-	pstS	SO4292	0.87	+0.2
4,471,757	-	pstS	SO4292	0.87	-0.4
4,471,757	-	pstS	SO4292	0.87	-0.5
4,471,759	+	pstS	SO4292	0.88	+0.0
4,471,775	+	pstS	SO4292	0.90	-0.3
4,471,789	+				-0.7
4,471,789	+				-0.9
4,471,791	+				-0.2
4,471,791	+				-0.5
4,471,797	-				-0.2
4,471,797	-				+0.1
4,471,799	-				-0.8
4,471,799	-				+0.4
4,471,799	-				-0.1
4,471,824	-				+0.7
4,471,831	-				-0.1
4,471,838	-				-0.0
4,471,877	+				+0.2
4,471,877	+				-0.7
4,471,878	+				-0.9
4,472,023	+				-0.1
4,472,023	+				-0.8
4,472,068	+				+0.3
4,472,068	+				+0.0
4,472,068	+				-1.0
4,472,070	+				-0.5
4,472,070	+				+1.3
4,472,070	+				+0.3
4,472,070	+				-0.0
4,472,070	+				-0.5
4,472,070	+				-0.4
4,472,070	+				-1.2
4,472,070	+				+0.0
4,472,070	+				-0.2
4,472,070	+				+0.4
4,472,070	+				-0.2
4,472,070	+				-0.1
4,472,070	+				-0.5
4,472,070	+				+0.1
4,472,070	+				-0.2
4,472,070	+				+0.4
4,472,070	+				+1.8
4,472,070	+				+0.9
4,472,070	+				+0.5
4,472,070	+				+0.1
4,472,070	+				+0.2
4,472,070	+				-0.5
4,472,070	+				-0.2
4,472,070	+				+0.2
4,472,070	+				+0.7
4,472,070	+				+0.2
4,472,070	+				+0.0
4,472,070	+				-0.1
4,472,070	+				-0.4
4,472,070	+				+0.3
4,472,070	+				+0.5
4,472,070	+				+0.1
4,472,070	+				-0.8
4,472,070	+				+0.5
4,472,070	+				-0.1
4,472,070	+				-0.1
4,472,076	-				+0.1
4,472,078	-				+0.9
4,472,078	-				-1.0
4,472,078	-				+0.0
4,472,078	-				+0.6
4,472,078	-				+0.6
4,472,078	-				+0.0
4,472,078	-				+1.5
4,472,078	-				-0.2
4,472,078	-				-0.8
4,472,078	-				-0.1
4,472,078	-				+0.0
4,472,078	-				-0.2
4,472,078	-				-0.0
4,472,078	-				-2.0
4,472,078	-				+0.3
4,472,078	-				-0.0
4,472,078	-				+0.0
4,472,078	-				-0.3
4,472,078	-				-0.1
4,472,078	-				-0.1
4,472,078	-				-0.4
4,472,078	-				+0.3
4,472,078	-				+0.7
4,472,078	-				-0.2
4,472,078	-				-0.1
4,472,079	+				-0.6
4,472,130	-				-0.1
4,472,248	+				-0.3
4,472,254	+				+0.4
4,472,262	-				+0.2
4,472,273	+				+0.1
4,472,294	-				-0.1
4,472,330	+				+0.2
4,472,360	+				+0.3
4,472,360	+				+0.2
4,472,365	+				-0.3
4,472,370	+				-0.2
4,472,370	+				+2.2
4,472,390	+				+0.3
4,472,391	+				+0.2
4,472,391	+				-0.0
4,472,391	+				-0.0
4,472,392	-				-0.4
4,472,399	-				-1.0
4,472,405	+				-1.0
4,472,405	+				+0.0
4,472,415	+				+0.4
4,472,415	+				-0.9
4,472,523	-				+0.9
4,472,523	-				+0.2
4,472,523	-				-0.2
4,472,523	-				+0.5
4,472,523	-				-1.6
4,472,523	-				+0.1
4,472,523	-				+0.4
4,472,523	-				+0.5
4,472,523	-				-0.1
4,472,523	-				+0.2
4,472,523	-				+0.6
4,472,523	-				-0.7
4,472,523	-				+0.5