Strain Fitness in Shewanella oneidensis MR-1 around SO3962

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
4,102,645	-	rpoN	SO3961	0.37	-0.7
4,102,648	+	rpoN	SO3961	0.37	-1.0
4,102,678	-	rpoN	SO3961	0.39	-0.5
4,102,901	-	rpoN	SO3961	0.54	-0.3
4,102,936	-	rpoN	SO3961	0.56	-0.2
4,103,142	+	rpoN	SO3961	0.70	-1.3
4,103,157	+	rpoN	SO3961	0.71	+0.2
4,103,165	-	rpoN	SO3961	0.72	-0.9
4,103,197	-	rpoN	SO3961	0.74	-0.7
4,103,365	+	rpoN	SO3961	0.86	-0.5
4,103,365	+	rpoN	SO3961	0.86	-1.2
4,103,373	-	rpoN	SO3961	0.86	-0.2
4,103,373	-	rpoN	SO3961	0.86	-2.7
4,103,383	-	rpoN	SO3961	0.87	-1.4
4,103,389	+	rpoN	SO3961	0.87	-1.7
4,103,389	+	rpoN	SO3961	0.87	+0.3
4,103,397	-	rpoN	SO3961	0.88	-0.6
4,103,487	-				-1.7
4,103,535	-				+0.0
4,103,561	-				-0.8
4,103,563	+				-0.1
4,103,563	+				+0.4
4,103,642	-	yfiA-3	SO3962	0.12	-0.8
4,103,657	+	yfiA-3	SO3962	0.17	-0.3
4,103,705	+	yfiA-3	SO3962	0.34	-0.9
4,103,823	+	yfiA-3	SO3962	0.75	-0.8
4,103,895	+				+0.1
4,103,942	+	ptsN	SO3963	0.10	-2.7
4,103,942	+	ptsN	SO3963	0.10	-3.0
4,103,950	-	ptsN	SO3963	0.12	-1.8
4,103,993	+	ptsN	SO3963	0.22	-3.6
4,104,001	-	ptsN	SO3963	0.23	-2.8
4,104,065	+	ptsN	SO3963	0.38	-1.5
4,104,065	+	ptsN	SO3963	0.38	-2.2
4,104,108	+	ptsN	SO3963	0.48	-3.6
4,104,278	+	ptsN	SO3963	0.86	-2.6
4,104,386	+				+0.6
4,104,394	-				-0.1
4,104,394	-				-0.2
4,104,465	+		SO3964	0.15	+0.8
4,104,473	-		SO3964	0.16	+0.1
4,104,473	-		SO3964	0.16	+0.2
4,104,574	-		SO3964	0.28	+0.3