Strain Fitness in Shewanella oneidensis MR-1 around SO2815

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
2,935,365	+				-0.6
2,935,373	-				+1.0
2,935,608	+				-0.3
2,935,608	+				+0.0
2,935,608	+				+0.1
2,935,608	+				+0.8
2,935,610	+				+0.5
2,935,610	+				-0.0
2,935,610	+				+0.4
2,935,610	+				+1.0
2,935,610	+				+0.0
2,935,616	-				-0.7
2,935,616	-				-0.0
2,935,616	-				-0.4
2,935,616	-				+0.6
2,935,616	-				-0.0
2,935,616	-				+0.5
2,935,616	-				+0.6
2,935,616	-				+0.1
2,935,618	-				+0.6
2,935,618	-				-0.6
2,935,618	-				+0.2
2,935,647	+				+0.2
2,935,654	-				+0.4
2,935,762	+				+0.6
2,935,762	+				-0.2
2,935,762	+				-0.5
2,935,772	+				-0.1
2,935,772	+				-0.9
2,935,772	+				+0.3
2,935,772	+				+0.1
2,935,772	+				-0.5
2,935,772	+				+0.1
2,935,772	+				+0.8
2,935,772	+				-0.1
2,935,772	+				+0.4
2,935,772	+				+0.5
2,935,772	+				+0.6
2,935,772	+				+0.1
2,935,772	+				-0.4
2,935,772	+				+0.7
2,935,772	+				-0.4
2,935,772	+				-0.6
2,935,772	+				-0.0
2,935,772	+				+0.5
2,935,772	+				+0.3
2,935,773	+				-0.4
2,935,775	-				+0.1
2,935,778	+				-1.6
2,935,780	-				+0.3
2,935,780	-				+0.6
2,935,780	-				-1.2
2,935,780	-				-0.2
2,935,780	-				+0.8
2,935,780	-				-1.1
2,935,780	-				-0.7
2,935,780	-				+0.2
2,935,780	-				+0.9
2,935,780	-				+0.0
2,935,780	-				-0.2
2,935,780	-				+0.1
2,935,780	-				+0.6
2,935,780	-				+0.4
2,935,780	-				+0.6
2,935,780	-				-0.1
2,935,780	-				+0.6
2,935,780	-				-0.5
2,935,780	-				+0.5
2,935,780	-				+0.7
2,935,790	-				+0.1
2,935,806	+				+0.5
2,935,814	-				+0.3
2,935,816	+				-0.2
2,935,857	-				+0.3
2,935,857	-				+0.3
2,935,883	+				+0.1
2,935,985	-				+1.4
2,936,135	+				+0.1
2,936,138	-				+0.5
2,936,152	-				+0.2
2,936,306	+				+2.0
2,936,318	+				-1.2
2,936,321	-				+0.5
2,936,326	-				+0.0
2,936,416	+				+0.4
2,936,423	+				+0.2
2,936,431	-				+0.5
2,936,455	-				+0.7
2,936,465	-				+0.0
2,936,526	-		SO2815	0.15	+0.4
2,936,703	+		SO2815	0.28	+0.4
2,936,703	+		SO2815	0.28	-0.9
2,936,711	-		SO2815	0.29	+0.7
2,936,811	+		SO2815	0.36	-0.3
2,936,847	-		SO2815	0.39	+0.4
2,936,857	-		SO2815	0.40	-0.3
2,936,896	-		SO2815	0.43	+0.2
2,937,040	+		SO2815	0.53	-1.5
2,937,040	+		SO2815	0.53	+0.2
2,937,040	+		SO2815	0.53	-0.1
2,937,040	+		SO2815	0.53	+0.5
2,937,040	+		SO2815	0.53	-0.5
2,937,040	+		SO2815	0.53	+0.1
2,937,040	+		SO2815	0.53	-0.6
2,937,042	+		SO2815	0.54	+0.8
2,937,048	-		SO2815	0.54	+0.1
2,937,050	-		SO2815	0.54	+0.8
2,937,050	-		SO2815	0.54	+0.4
2,937,050	-		SO2815	0.54	+0.1
2,937,200	-		SO2815	0.66	+0.3
2,937,269	-		SO2815	0.71	+0.3
2,937,502	-		SO2815	0.88	+0.5
2,937,630	-				+0.1
2,937,670	-				+0.5
2,937,712	+				-0.3
2,937,719	-				+0.3
2,937,719	-				-0.4
2,937,791	+				+0.0
2,937,791	+				-0.0
2,937,791	+				-1.3
2,937,791	+				+0.6
2,937,791	+				+0.2
2,937,791	+				+0.2
2,937,795	+				+0.3
2,937,798	-				-1.2
2,937,799	-				+0.0
2,937,799	-				-0.4
2,937,799	-				-0.1
2,937,799	-				-0.0
2,937,803	-				+0.7
2,937,813	-				+0.6
2,937,813	-				-0.1