Strain Fitness in Shewanella oneidensis MR-1 around SO2430

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
2,538,446	+	ruvB	SO2429	0.26	-1.4
2,538,619	-	ruvB	SO2429	0.43	-1.4
2,538,695	-	ruvB	SO2429	0.51	-1.6
2,539,094	-				-2.3
2,539,131	+				-0.3
2,539,233	-				-0.5
2,539,326	-				-0.8
2,539,326	-				-1.5
2,539,405	+	ruvA	SO2430	0.21	-1.6
2,539,481	-	ruvA	SO2430	0.33	-2.6
2,539,503	-	ruvA	SO2430	0.37	-0.8
2,539,584	+	ruvA	SO2430	0.50	+0.2
2,539,886	+				-2.7
2,539,891	+				-1.1
2,539,964	-	ruvC	SO2431	0.14	-1.0
2,540,395	-				-0.7
2,540,475	+				-1.4
2,540,483	-				+0.3
2,540,570	-				-0.1
2,540,855	-		SO2432	0.34	+0.1