Strain Fitness in Shewanella oneidensis MR-1 around SO2281

Experiment: Paraquat dichloride 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.125 mg/ml
2,392,971	-		SO2280	0.77	-0.3
2,392,995	+		SO2280	0.79	+0.4
2,393,007	+		SO2280	0.80	+0.1
2,393,193	+				+0.8
2,393,414	+				-0.0
2,393,427	-				-1.0
2,393,442	+				+0.9
2,393,450	-				+0.4
2,393,469	-				-0.2
2,393,647	-				-0.4
2,393,783	+				-0.3
2,393,853	+				+0.6
2,393,873	+				-0.0
2,393,881	-				+0.7
2,393,995	-		SO2281	0.14	-0.1
2,394,024	-		SO2281	0.16	-0.2
2,394,134	+		SO2281	0.22	+0.3
2,394,174	+		SO2281	0.24	-0.3
2,394,576	+		SO2281	0.45	+0.0
2,394,624	+		SO2281	0.48	+0.5
2,394,872	+		SO2281	0.61	-0.2
2,395,053	-		SO2281	0.71	+0.0
2,395,289	+		SO2281	0.83	+0.3
2,395,336	+		SO2281	0.86	-0.3
2,395,344	-		SO2281	0.86	+0.8
2,395,351	+		SO2281	0.87	+0.2
2,395,351	+		SO2281	0.87	+0.6
2,395,369	-		SO2281	0.88	+0.1
2,395,457	-				-0.1
2,395,564	-				-0.0
2,395,583	+				-0.5
2,395,583	+				-0.4
2,395,670	-				-0.3
2,395,745	+				+0.3
2,395,787	-				+0.1
2,395,896	-		SO2282	0.10	+0.1
2,395,942	-		SO2282	0.14	+0.4
2,395,946	+		SO2282	0.14	+0.3
2,396,022	+		SO2282	0.20	-0.2
2,396,030	-		SO2282	0.20	-0.2
2,396,106	+		SO2282	0.26	-0.7
2,396,109	-		SO2282	0.26	+0.0
2,396,165	+		SO2282	0.30	+0.0
2,396,311	+		SO2282	0.41	+0.7
2,396,427	+		SO2282	0.49	+0.4
2,396,429	-		SO2282	0.50	+0.0
2,396,495	-		SO2282	0.54	-0.8